CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32565	Soybean	extracellular	96.21	95.75
VIT_08s0007g04740.t01	Wine grape	cytosol	86.73	86.73
KRH67770	Soybean	endoplasmic reticulum	86.26	86.26
KRG96048	Soybean	cytosol	85.78	85.78
AT5G03530.1	Thale cress	cytosol	82.94	83.33
CDY10375	Canola	cytosol	82.94	83.33
CDY44372	Canola	cytosol	83.41	83.02
CDX70301	Canola	cytosol	82.46	82.86
CDY04887	Canola	cytosol	82.94	82.55
Bra028830.1-P	Field mustard	cytosol	82.94	82.55
Bra009524.1-P	Field mustard	cytosol	81.99	82.38
Solyc09g008460.2.1	Tomato	plastid	81.52	79.63
PGSC0003DMT400009952	Potato	cytosol	81.04	79.17
Solyc10g086310.1.1	Tomato	cytosol	78.2	78.95
PGSC0003DMT400049302	Potato	cytosol	79.62	78.14
CDY11028	Canola	cytosol	31.75	76.14
AT3G09910.1	Thale cress	cytosol	72.99	75.12
CDY41571	Canola	cytosol	72.51	75.0
CDY54608	Canola	cytosol	72.04	74.51
Bra029804.1-P	Field mustard	cytosol	71.09	73.53
GSMUA_Achr11P...	Banana	cytosol	70.14	70.14
GSMUA_AchrUn_...	Banana	cytosol	71.09	70.09
EER95509	Sorghum	cytosol	69.67	70.0
TraesCS4B01G310800.1	Wheat	cytosol, extracellular	67.77	69.08
Os03t0146000-01	Rice	plasma membrane	68.72	69.05
TraesCS4A01G410700.1	Wheat	cytosol, extracellular	67.3	68.6
EER91530	Sorghum	cytosol	70.14	68.2
TraesCS4D01G308700.1	Wheat	cytosol, extracellular	66.82	68.12
KRH18093	Soybean	endoplasmic reticulum	68.72	67.44
KRH43557	Soybean	cytosol	66.35	66.99
KRH15908	Soybean	mitochondrion	67.77	66.82
KRH53905	Soybean	cytosol	65.4	66.67
TraesCS1D01G142000.1	Wheat	cytosol, extracellular	67.3	66.36
KRH64034	Soybean	cytosol	64.93	66.18
KRH59573	Soybean	endoplasmic reticulum	65.4	66.03
HORVU1Hr1G038070.1	Barley	cytosol	67.77	65.9
TraesCS1A01G143100.1	Wheat	cytosol	67.77	65.9
TraesCS1B01G158500.1	Wheat	cytosol	67.77	65.9
Os10t0456600-01	Rice	cytosol	68.72	65.32
KRH34658	Soybean	cytosol	63.98	63.68
KRG92126	Soybean	endoplasmic reticulum	63.98	63.68
Zm00001d014097_P002	Maize	cytosol	69.19	59.11
Zm00001d032811_P002	Maize	cytosol	69.19	59.11
HORVU4Hr1G079250.1	Barley	cytosol, plastid	66.82	56.63
Zm00001d048393_P001	Maize	plastid	68.25	46.6
KRH55263	Soybean	cytosol	27.01	39.58

Protein Annotations

EntrezGene:100818801	MapMan:22.8.1.3	Gene3D:3.40.50.300	EMBL:ACUP02008219	EnsemblPlantsGene:GLYMA_13G146600	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0016787	UniProt:I1LZA9
EnsemblPlants:KRH19962	ProteinID:KRH19962	ProteinID:KRH19962.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF579	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000233B0A6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:25940525..25944599

Molecular Weight (calculated)

23309.9 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.146

Length

211 amino acids

Sequence
(BLAST)

001: MSSSSGQSSG YDLSFKILLI GDSAVGKSSL LVSFISNSAE DIAPTIGVDF KIKMLTVGGK RLKLTIWDTA GQERFRTLTS SYYRGAQGII LVYDVTRRDT
101: FTNLSLVWSK EVELYSTNQN CVKMLVGNKV DRDSERVVSK EEGLALAEEL GCLFFECSAK TRENVERCFE ELALKIMEVP SLLEEGSTAV KRNILKQQQQ
201: PQASEFGGCC S

Best Arabidopsis Sequence Match ( AT5G03530.1 )
(BLAST)

001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL VSFISSSVED LAPTIGVDFK IKQLTVGGKR LKLTIWDTAG QERFRTLTSS YYRGAQGIIL VYDVTRRETF
101: TNLVDVWGKE IELYSTNQEC VRMLVGNKVD RESERGVSRE EGIALAKELN CMFLECSART RQNVEQCFEE LALKIMEVPS LLEEGSSAVK RNILKQKPEH
201: QTNTQSGCCS

Arabidopsis Description

RABC2ARABC2A [Source:UniProtKB/TrEMBL;Acc:A0A178UJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.