Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92126 | Soybean | endoplasmic reticulum | 94.34 | 94.34 |
| VIT_13s0019g05190.t01 | Wine grape | cytosol | 71.23 | 71.23 |
| PGSC0003DMT400079770 | Potato | cytosol | 69.81 | 68.52 |
| Solyc11g008020.1.1 | Tomato | cytosol | 69.81 | 68.52 |
| KRG96048 | Soybean | cytosol | 65.09 | 65.4 |
| KRH67770 | Soybean | endoplasmic reticulum | 65.09 | 65.4 |
| KRH19962 | Soybean | cytosol | 63.68 | 63.98 |
| KRH32565 | Soybean | extracellular | 63.68 | 63.68 |
| KRH15908 | Soybean | mitochondrion | 58.49 | 57.94 |
| KRH18093 | Soybean | endoplasmic reticulum | 58.49 | 57.67 |
| KRH64034 | Soybean | cytosol | 56.13 | 57.49 |
| KRH59573 | Soybean | endoplasmic reticulum | 56.6 | 57.42 |
| KRH53905 | Soybean | cytosol | 55.66 | 57.0 |
| KRH43557 | Soybean | cytosol | 56.13 | 56.94 |
| KRH55263 | Soybean | cytosol | 22.17 | 32.64 |
Protein Annotations
| EntrezGene:100500172 | MapMan:22.8.1.3 | Gene3D:3.40.50.300 | EMBL:ACUP02006610 | EMBL:BT091034 | UniProt:C6T0S9 |
| EnsemblPlantsGene:GLYMA_10G197400 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0016787 | EnsemblPlants:KRH34658 | ProteinID:KRH34658 | ProteinID:KRH34658.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF643 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001B155BE | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:42863465..42868043
Molecular Weight (calculated)
23570.2 Da
IEP (calculated)
9.163
GRAVY (calculated)
-0.274
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSASRVESS NYDYSFKVLL IGDSGVGKSS LLLSFISNSN SINDLSPTIG VDFKIKLFTV GGKRLKLTIW DTAGQERFGT VISSYYRGAH GIILVYDVTR
101: RETFTNLIDI WAKEVERYST NHGSIKILVG NKVDKDSERA VSKEEGMALA QQHRCLFLEC SAKTRENVQQ CFNDLTLKIL DVPGLREKGS VAVKRQKQKH
201: IYETSQSAGC CS
101: RETFTNLIDI WAKEVERYST NHGSIKILVG NKVDKDSERA VSKEEGMALA QQHRCLFLEC SAKTRENVQQ CFNDLTLKIL DVPGLREKGS VAVKRQKQKH
201: IYETSQSAGC CS
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Arabidopsis Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.