Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54608 | Canola | cytosol | 96.08 | 96.08 |
| AT3G09910.1 | Thale cress | cytosol | 88.24 | 87.8 |
| CDY10375 | Canola | cytosol | 82.84 | 80.48 |
| CDX70301 | Canola | cytosol | 82.35 | 80.0 |
| CDY04887 | Canola | cytosol | 81.86 | 78.77 |
| CDY44372 | Canola | cytosol | 80.88 | 77.83 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 80.39 | 77.73 |
| Solyc10g086310.1.1 | Tomato | cytosol | 76.47 | 74.64 |
| PGSC0003DMT400049302 | Potato | cytosol | 77.45 | 73.49 |
| KRH67770 | Soybean | endoplasmic reticulum | 75.98 | 73.46 |
| KRG96048 | Soybean | cytosol | 75.49 | 72.99 |
| Solyc09g008460.2.1 | Tomato | plastid | 76.96 | 72.69 |
| PGSC0003DMT400009952 | Potato | cytosol | 76.96 | 72.69 |
| KRH19962 | Soybean | cytosol | 75.0 | 72.51 |
| KRH32565 | Soybean | extracellular | 75.0 | 72.17 |
| CDY11028 | Canola | cytosol | 30.88 | 71.59 |
| CDY69246 | Canola | cytosol | 51.96 | 67.95 |
| CDY35803 | Canola | cytosol | 68.63 | 66.04 |
| CDY14967 | Canola | cytosol | 68.14 | 65.57 |
| CDY43856 | Canola | cytosol | 68.14 | 65.26 |
| CDY47787 | Canola | cytosol | 67.65 | 65.09 |
| Os03t0146000-01 | Rice | plasma membrane | 65.2 | 63.33 |
| GSMUA_Achr11P... | Banana | cytosol | 65.2 | 63.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.2 | 62.15 |
| EER95509 | Sorghum | cytosol | 63.24 | 61.43 |
| TraesCS4B01G310800.1 | Wheat | cytosol, extracellular | 61.76 | 60.87 |
| EER91530 | Sorghum | cytosol | 64.71 | 60.83 |
| TraesCS1D01G142000.1 | Wheat | cytosol, extracellular | 63.73 | 60.75 |
| TraesCS4A01G410700.1 | Wheat | cytosol, extracellular | 61.27 | 60.39 |
| TraesCS4D01G308700.1 | Wheat | cytosol, extracellular | 60.78 | 59.9 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 63.24 | 59.45 |
| TraesCS1B01G158500.1 | Wheat | cytosol | 62.75 | 58.99 |
| TraesCS1A01G143100.1 | Wheat | cytosol | 62.75 | 58.99 |
| Os10t0456600-01 | Rice | cytosol | 63.24 | 58.11 |
| CDY51571 | Canola | cytosol | 24.02 | 54.44 |
| Zm00001d032811_P002 | Maize | cytosol | 64.71 | 53.44 |
| Zm00001d014097_P002 | Maize | cytosol | 64.22 | 53.04 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 60.78 | 49.8 |
| Zm00001d048393_P001 | Maize | plastid | 62.75 | 41.42 |
Protein Annotations
| MapMan:22.8.1.3 | Gene3D:3.40.50.300 | GO:A0A078HV38 | UniProt:A0A078HV38 | EnsemblPlants:CDY41571 | ProteinID:CDY41571 |
| ProteinID:CDY41571.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00073212001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF579 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EB33E5 | SEG:seg | : | : |
Description
BnaC05g43080DBnaC05g43080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV38]
Coordinates
chrLK032501:+:18431..19978
Molecular Weight (calculated)
22852.5 Da
IEP (calculated)
8.978
GRAVY (calculated)
-0.289
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL LSFISSSVQD LAPTIGVDFK IKQLKVRGKR VKLTIWDTAG QEKFRTLTSS YFRGSQGIIL VYDVTKRETF
101: LNLADVWAKE IELYSTNHDC IKMLVGNKVD IESERKVSRE EGTALAKELK FLFHECSART RENVQQCFEE LALKIMEVPS LLQEGSSSLK RKPDSRTHQS
201: RCCS
101: LNLADVWAKE IELYSTNHDC IKMLVGNKVD IESERKVSRE EGTALAKELK FLFHECSART RENVQQCFEE LALKIMEVPS LLQEGSSSLK RKPDSRTHQS
201: RCCS
001: MGSSSGQSGY DLSFKILLIG DSGVGKSSLL LSFISSSVED LAPTIGVDFK IKQMKVRGKR LKLTIWDTAG QEKFRTLTSS YFRGSQGIIL VYDVTKRETF
101: LNLADIWAKE IELYSTNHDC IKMLVGNKVD RESERKVSRE EGMALAKDLN CLFHECSART RENVNGCFEE LALKIMEVPS LLEEGSSSVK RKPDYRAHQG
201: RCCSS
101: LNLADIWAKE IELYSTNHDC IKMLVGNKVD RESERKVSRE EGMALAKDLN CLFHECSART RENVNGCFEE LALKIMEVPS LLEEGSSSVK RKPDYRAHQG
201: RCCSS
Arabidopsis Description
RABC2BRABC2b [Source:UniProtKB/TrEMBL;Acc:A0A178V665]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.