Factsheet for GSMUA_Achr10P10560_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03080_001	Banana	cytosol	87.14	87.14
CDY14967	Canola	cytosol	87.62	86.79
AT1G43890.1	Thale cress	cytosol	87.14	86.32
Solyc04g064510.2.1	Tomato	cytosol	85.71	86.12
TraesCS3A01G421700.1	Wheat	cytosol, golgi	87.14	85.92
Bra036934.1-P	Field mustard	cytosol	86.67	85.85
CDY51571	Canola	cytosol	36.67	85.56
Bra032196.1-P	Field mustard	cytosol	86.67	85.45
CDY43856	Canola	cytosol	86.67	85.45
CDY35803	Canola	cytosol	86.19	85.38
GSMUA_AchrUn_...	Banana	cytosol	49.52	85.25
Bra034924.1-P	Field mustard	cytosol	85.71	84.91
CDY47787	Canola	cytosol	85.71	84.91
PGSC0003DMT400063864	Potato	cytosol	84.29	84.69
EES13169	Sorghum	cytosol	85.71	83.72
HORVU2Hr1G127520.1	Barley	cytosol	85.24	82.87
HORVU2Hr1G127540.1	Barley	cytosol	85.24	82.87
TraesCS2B01G617000.1	Wheat	cytosol	85.24	82.49
TraesCS2D01G567100.1	Wheat	cytosol	85.24	82.49
TraesCSU01G137100.1	Wheat	cytosol, plastid	85.24	81.74
CDY69246	Canola	cytosol	60.0	80.77
GSMUA_Achr11P...	Banana	cytosol	60.48	60.19
GSMUA_AchrUn_...	Banana	cytosol	60.0	58.88
GSMUA_Achr5P15600_001	Banana	cytosol	40.0	54.55
GSMUA_Achr4P26700_001	Banana	cytosol	13.33	25.23
GSMUA_Achr5P15590_001	Banana	cytosol	11.43	18.9

Protein Annotations

MapMan:22.8.1.3	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr10G10560_001	EnsemblPlants:GSMUA_Achr10P10560_001	EnsemblPlants:GSMUA_Achr10T10560_001
UniProt:M0RH32	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF874	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029541C6	:

Description

GTP-binding protein yptV3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10560_001]

Coordinates

chr10:-:20163147..20168027

Molecular Weight (calculated)

23362.9 Da

IEP (calculated)

5.464

GRAVY (calculated)

-0.234

Length

210 amino acids

Sequence
(BLAST)

001: MDSASSGQPE FDYLFKLLLI GDSGVGKSSL LLRFTSDSFE DLSPTIGVDF KVKIVNIGGK RLKLAIWDTA GQERFRTLTS SYYRGAQGVI MVYDVTRRDT
101: FTNLSDIWAK EIELYSTNQD CIKMLVGNKV DKEGERAVTK KEGIDFAREY GCLFLECSAK TRVNVEQCFE ELVLKILETP SLCAEGSSGL KKNIFKQKPP
201: QADASTSSCC

Best Arabidopsis Sequence Match ( AT1G43890.3 )
(BLAST)

001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS

Arabidopsis Description

RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.