Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69246 | Canola | cytosol | 57.75 | 52.56 |
| VIT_00s1603g00010.t01 | Wine grape | cytosol | 21.13 | 50.0 |
| HORVU2Hr1G127540.1 | Barley | cytosol | 64.79 | 42.59 |
| HORVU2Hr1G127520.1 | Barley | cytosol | 64.79 | 42.59 |
| PGSC0003DMT400063864 | Potato | cytosol | 61.27 | 41.63 |
| Solyc04g064510.2.1 | Tomato | cytosol | 60.56 | 41.15 |
| KRH55263 | Soybean | cytosol | 41.55 | 40.97 |
| AT1G43890.1 | Thale cress | cytosol | 59.15 | 39.62 |
| CDY14967 | Canola | cytosol | 59.15 | 39.62 |
| CDY43856 | Canola | cytosol | 59.15 | 39.44 |
| Bra032196.1-P | Field mustard | cytosol | 59.15 | 39.44 |
| CDY47787 | Canola | cytosol | 58.45 | 39.15 |
| CDY35803 | Canola | cytosol | 58.45 | 39.15 |
| Bra036934.1-P | Field mustard | cytosol | 58.45 | 39.15 |
| Bra034924.1-P | Field mustard | cytosol | 58.45 | 39.15 |
| VIT_13s0019g05280.t01 | Wine grape | cytosol | 41.55 | 35.76 |
| VIT_15s0024g00940.t01 | Wine grape | cytosol, endoplasmic reticulum | 29.58 | 29.37 |
| GSMUA_Achr5P15600_001 | Banana | cytosol | 31.69 | 29.22 |
| HORVU1Hr1G038070.1 | Barley | cytosol | 41.55 | 27.19 |
| HORVU4Hr1G079250.1 | Barley | cytosol, plastid | 39.44 | 22.49 |
| VIT_13s0047g01030.t01 | Wine grape | mitochondrion | 19.72 | 21.54 |
| CDY51571 | Canola | cytosol | 7.75 | 12.22 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287EYT6 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G025450 | EnsemblPlants:HORVU1Hr1G025450.1 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF874 |
| SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000B47A4A8 |
Description
No Description!
Coordinates
chrchr1H:-:123809683..123812024
Molecular Weight (calculated)
16497.0 Da
IEP (calculated)
9.358
GRAVY (calculated)
0.002
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: ETYIIFQYNP WCSNVFLLSN GFFLPFFLSN PIRPTYLTLR ELHLFLLAGV DFKVKMVNIA GKKLKLAVWD TGTQERFRTL TSSYYRGAQG IIMVYDVTRR
101: DTFTNLSNIW AKEIDLYSTN QDCIKMLVGN KVDKVGWAFP ES
101: DTFTNLSNIW AKEIDLYSTN QDCIKMLVGN KVDKVGWAFP ES
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Arabidopsis Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.