Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1603g00010.t01 | Wine grape | cytosol | 18.79 | 51.67 |
| HORVU1Hr1G025450.1 | Barley | endoplasmic reticulum | 35.76 | 41.55 |
| VIT_08s0007g04740.t01 | Wine grape | cytosol | 52.12 | 40.76 |
| VIT_13s0019g05190.t01 | Wine grape | cytosol | 52.12 | 40.57 |
| EES13169 | Sorghum | cytosol | 48.48 | 37.21 |
| TraesCS3A01G421700.1 | Wheat | cytosol, golgi | 46.67 | 36.15 |
| TraesCS2B01G617000.1 | Wheat | cytosol | 47.27 | 35.94 |
| TraesCS2D01G567100.1 | Wheat | cytosol | 47.27 | 35.94 |
| GSMUA_Achr5P15600_001 | Banana | cytosol | 33.33 | 35.71 |
| TraesCSU01G137100.1 | Wheat | cytosol, plastid | 47.27 | 35.62 |
| VIT_18s0001g15090.t01 | Wine grape | plastid | 47.27 | 32.91 |
| KRH55263 | Soybean | cytosol | 26.06 | 29.86 |
| VIT_13s0047g01030.t01 | Wine grape | mitochondrion | 23.03 | 29.23 |
| VIT_15s0024g00940.t01 | Wine grape | cytosol, endoplasmic reticulum | 22.42 | 25.87 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | ProteinID:CBI31384 | ProteinID:CBI31384.3 | UniProt:D7TM17 | EMBL:FN595998 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF579 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0001BE3507 | ArrayExpress:VIT_13s0019g05280 | EnsemblPlantsGene:VIT_13s0019g05280 | EnsemblPlants:VIT_13s0019g05280.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13:-:7078377..7084405
Molecular Weight (calculated)
19206.3 Da
IEP (calculated)
8.820
GRAVY (calculated)
-0.428
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNPTVEEKV AERPPEMRRR VMCPQEILHK LYVGVLHPKR VDFKIILLTI GGKKLKLTIW DTAGQERFGT LTNTYYRGVH GIILVYDVTR QETFTNLSDV
101: WEKEVEFYST NHKCIDFFVG NKVDRDSERN VTREGMSLAQ EHNVHFLNVV LKLERMCSNA LKNSP
101: WEKEVEFYST NHKCIDFFVG NKVDRDSERN VTREGMSLAQ EHNVHFLNVV LKLERMCSNA LKNSP
001: MGSSSGQPEF DYLFKVLLIG DSGVGKSSLL LSFTSNTFDD LSPTIGVDFK VKYLTIGEKK LKLAIWDTAG QERFRTLTSS YYRGAQGIIM VYDVTRRDTF
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
101: TNLSDIWAKE IDLYSTNQDC IKMLVGNKVD KESERAVSKK EGIDFAREYG CLFLECSAKT RVNVEQCFEE LVLKILETPS LTAEGSSGGK KNIFKQNPAQ
201: TTSTSSSYCC SS
Arabidopsis Description
RABC1Ras-related protein RABC1 [Source:UniProtKB/Swiss-Prot;Acc:O23657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.