Factsheet for GSMUA_Achr6P13250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72626	Canola	cytosol, extracellular, plastid	62.1	79.78
CDY70774	Canola	cytosol, extracellular, plastid	61.81	79.7
PGSC0003DMT400006855	Potato	cytosol, mitochondrion, nucleus	32.07	78.01
KRH67910	Soybean	plastid	84.26	60.84
VIT_08s0007g03390.t01	Wine grape	plastid	86.01	60.7
KRG96197	Soybean	plastid	84.26	60.46
Solyc10g083490.1.1	Tomato	plastid	84.55	60.42
Solyc09g009430.2.1	Tomato	plastid	83.97	60.25
Bra006945.1-P	Field mustard	plastid	80.47	59.61
CDX78122	Canola	plastid	80.47	59.48
CDX73607	Canola	plastid	79.88	59.05
CDX95369	Canola	extracellular, golgi, plastid	25.66	58.67
AT3G52750.2	Thale cress	plastid	80.47	58.35
KRH32740	Soybean	plastid	81.92	58.06
KRH20058	Soybean	plastid	82.22	58.02
TraesCS1D01G276000.1	Wheat	plastid	79.59	57.72
KXG22108	Sorghum	plastid	79.01	57.54
TraesCS1A01G276500.1	Wheat	plastid	79.3	57.51
CDY43739	Canola	plastid	79.88	57.44
Bra017252.1-P	Field mustard	plastid	79.59	57.23
TraesCS1B01G285700.2	Wheat	plastid	78.72	57.08
AT2G36250.3	Thale cress	plastid	79.01	56.69
Os05t0443800-01	Rice	plastid	76.68	55.72
PGSC0003DMT400006854	Potato	cytosol	53.64	52.42
Zm00001d010135_P003	Maize	plastid	76.68	51.07
HORVU1Hr1G073840.4	Barley	plastid	78.43	49.91
GSMUA_Achr7P06230_001	Banana	plastid	50.15	41.55

Protein Annotations

MapMan:13.6.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G13250_001
EnsemblPlants:GSMUA_Achr6P13250_001	EnsemblPlants:GSMUA_Achr6T13250_001	InterPro:IPR036525	InterPro:IPR037103	UniProt:M0T6M3	HAMAP:MF_00909
PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF14
SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C
InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0002955602	SEG:seg

Description

Cell division protein ftsZ [Source:GMGC_GENE;Acc:GSMUA_Achr6G13250_001]

Coordinates

chr6:-:8845199..8851166

Molecular Weight (calculated)

36166.5 Da

IEP (calculated)

4.838

GRAVY (calculated)

0.041

Length

343 amino acids

Sequence
(BLAST)

001: MIESSMKGVE FWIVNTDVQA MRMSSIYPEH RLQIGEELTK GLGAGGNPDV GMNAAKESKE LIQEAVYGAD MVFVTAGMGG GTGTGGAPII AGIAKSMGVL
101: TVGIVTTPFS FEGRRRAVQA QEGIAALRDS VDTLIVIPND KLLSAVSPNT PMIEAFNLAD DILRQGVRGI SDIITVPGLV NVDFADVRAI MADAGSSLMG
201: IGTGTGKTRA RDAALNAIQS PLLDIGIERA TGIVWNITGG SDLTLYEVNA AAEVIYDLVD PSANIIFGAV IDQSLSGQVS ITLIATGLKR QDEQEGRNLQ
301: GAQLGHGDNL GMKRRSNSRS TEGGIVEIPE FLRKKVHSRS PRF

Best Arabidopsis Sequence Match ( AT3G52750.1 )
(BLAST)

001: MAAYVSPCLT PPDSRVLTVL RKSVLPDHHL GTRVGCLRMS EGTTKRYRVV ASHKYESSSI RNSLNSHSTS HFQSQDSFLN LHPEISMLNP RKETSSVPIT
101: EDLDELSTPN TYNEARIKVI GVGGGGSNAV NRMIESEMIG VEFWIVNTDI QAMRISPVFP DNRLQIGKEL TRGLGAGGNP EIGMNAATES KEAIQEALYG
201: SDMVFVTAGM GGGTGTGGAP IIAGVAKAMG ILTVGIVTTP FSFEGRRRAL QAQEGIAALR DNVDTLIVIP NDKLLAAVSQ STPVTEAFNL ADDILRQGVR
301: GISDIITIPG LVNVDFADVR AIMANAGSSL MGIGTATGKT RARDAALNAI QSPLLDIGIE RATGIVWNIT GGSDLTLFEV NAAAEVIYDL VDPTANLIFG
401: AVVDPSYSGQ ISITLIATGF KRQEEGEGRP LQATQADASM GATRRPSSSF TEGSSIEIPE FLKKKGRSRY PRL

Arabidopsis Description

FTSZ2-2Cell division protein FtsZ homolog 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXJ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.