Factsheet for Solyc10g083490.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009430.2.1	Tomato	plastid	89.17	89.54
CDY70774	Canola	cytosol, extracellular, plastid	46.88	84.59
GSMUA_Achr6P13250_001	Banana	cytosol	60.42	84.55
CDY72626	Canola	cytosol, extracellular, plastid	46.88	84.27
VIT_08s0007g03390.t01	Wine grape	plastid	80.83	79.84
KRH67910	Soybean	plastid	75.83	76.63
KRG96197	Soybean	plastid	76.04	76.36
KRH32740	Soybean	plastid	76.25	75.62
KRH20058	Soybean	plastid	76.25	75.31
CDX73607	Canola	plastid	71.88	74.35
CDX78122	Canola	plastid	71.88	74.35
Bra006945.1-P	Field mustard	plastid	71.67	74.3
AT3G52750.2	Thale cress	plastid	72.08	73.15
AT2G36250.3	Thale cress	plastid	71.88	72.18
CDY43739	Canola	plastid	71.67	72.12
Bra017252.1-P	Field mustard	plastid	71.46	71.91
TraesCS1D01G276000.1	Wheat	plastid	67.71	68.71
TraesCS1A01G276500.1	Wheat	plastid	67.5	68.5
TraesCS1B01G285700.2	Wheat	plastid	67.5	68.5
KXG22108	Sorghum	plastid	67.08	68.37
Os05t0443800-01	Rice	plastid	66.25	67.37
CDX95369	Canola	extracellular, golgi, plastid	19.58	62.67
Zm00001d010135_P003	Maize	plastid	66.04	61.55
HORVU1Hr1G073840.4	Barley	plastid	66.88	59.55
Solyc07g065050.2.1	Tomato	plastid	41.04	47.02
Solyc12g014560.1.1	Tomato	plastid	39.79	40.9

Protein Annotations

MapMan:13.6.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010020	GO:GO:0016043	GO:GO:0016787	InterPro:IPR036525
InterPro:IPR037103	UniProt:K4D3D6	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423
ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF14	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490
SUPFAM:SSF55307	EnsemblPlantsGene:Solyc10g083490.1	EnsemblPlants:Solyc10g083490.1.1	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom
InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0002769DB9	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:63266551..63276793

Molecular Weight (calculated)

50620.7 Da

IEP (calculated)

5.570

GRAVY (calculated)

0.004

Length

480 amino acids

Sequence
(BLAST)

001: MASCTSAVFV PLDTRLRNGV LTVLARRVCP LKMQDEKVGY LSVNQKGISS CPQFKCSANS HRFNNYQSKD SFLNLHPEIS MLQGEGNHTF TTSRQESSSG
101: GVAESLMDSS SLKNFNEAKI KVVGVGGGGS NAVNRMIESS MNGVEFWIVN TDIQAIRMSP VFPENRLPIG QELTRGLGAG GNPDIGMNAA KESKEAIEEA
201: VRGADMVFVT AGMGGGTGTG GAPIIAGIAK SMGILTVGIV TTPFSFEGRR RAVQAQEGIA ALRENVDTLI VIPNDKLLTA VSLSTPVTEA FNLADDILRQ
301: GVRGISDIIT IPGLVNVDFA DVRAIMANAG SSLMGIGTAT GKTRARDAAL NAVQSPLLDI GIERATGIVW NITGGNDLTL FEVNAAAEVI YDLVDPSANL
401: IFGAVIDPSL SGQVSITLIA TGFKRQEESD GRPLQGNQLA QGDANLGINR RPSSFLEGGS VEIPEFLRKK GGSRSLVCFK

Best Arabidopsis Sequence Match ( AT2G36250.1 )
(BLAST)

001: MATYVSPCFT PSDSRLLTVL RKNVLPENHL GRLNSIRTID SKKNRVVVAA QKSESSPIRN SPRHYQSQAQ DPFLNLHPEI SMLRGEGTST IVNPRKETSS
101: GPVVEDFEEP SAPSNYNEAR IKVIGVGGGG SNAVNRMIES EMSGVEFWIV NTDIQAMRMS PVLPDNRLQI GKELTRGLGA GGNPEIGMNA ARESKEVIEE
201: ALYGSDMVFV TAGMGGGTGT GAAPVIAGIA KAMGILTVGI ATTPFSFEGR RRTVQAQEGL ASLRDNVDTL IVIPNDKLLT AVSQSTPVTE AFNLADDILR
301: QGVRGISDII TIPGLVNVDF ADVRAIMANA GSSLMGIGTA TGKSRARDAA LNAIQSPLLD IGIERATGIV WNITGGSDLT LFEVNAAAEV IYDLVDPTAN
401: LIFGAVVDPA LSGQVSITLI ATGFKRQEEG EGRTVQMVQA DAASVGATRR PSSSFRESGS VEIPEFLKKK GSSRYPRV

Arabidopsis Description

FTSZ2-1Cell division protein FtsZ homolog 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82533]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.