Factsheet for VIT_08s0007g03390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006855	Potato	cytosol, mitochondrion, nucleus	25.31	87.23
CDY70774	Canola	cytosol, extracellular, plastid	47.33	86.47
CDY72626	Canola	cytosol, extracellular, plastid	47.33	86.14
GSMUA_Achr6P13250_001	Banana	cytosol	60.7	86.01
KRH67910	Soybean	plastid	80.04	81.89
Solyc09g009430.2.1	Tomato	plastid	80.45	81.8
Solyc10g083490.1.1	Tomato	plastid	79.84	80.83
KRG96197	Soybean	plastid	79.01	80.33
KRH20058	Soybean	plastid	79.84	79.84
KRH32740	Soybean	plastid	79.42	79.75
CDX73607	Canola	plastid	74.07	77.59
Bra006945.1-P	Field mustard	plastid	73.87	77.54
PGSC0003DMT400006854	Potato	cytosol	55.97	77.49
CDX78122	Canola	plastid	73.66	77.16
AT3G52750.2	Thale cress	plastid	73.66	75.69
AT2G36250.3	Thale cress	plastid	74.28	75.52
CDY43739	Canola	plastid	73.87	75.26
Bra017252.1-P	Field mustard	plastid	73.25	74.63
TraesCS1A01G276500.1	Wheat	plastid	66.87	68.71
TraesCS1B01G285700.2	Wheat	plastid	66.46	68.29
TraesCS1D01G276000.1	Wheat	plastid	66.26	68.08
Os05t0443800-01	Rice	plastid	66.05	68.01
KXG22108	Sorghum	plastid	65.43	67.52
CDX95369	Canola	extracellular, golgi, plastid	19.96	64.67
Zm00001d010135_P003	Maize	plastid	63.79	60.19
HORVU1Hr1G073840.4	Barley	plastid	65.02	58.63
VIT_19s0090g01320.t01	Wine grape	cytosol	38.27	51.52

Protein Annotations

EntrezGene:100251032	wikigene:100251032	MapMan:13.6.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	UniProt:A5AR17
EMBL:AM432662	ProteinID:CAN80330	ProteinID:CAN80330.1	ProteinID:CCB55429	ProteinID:CCB55429.1	InterPro:Cell_div_FtsZ
InterPro:Cell_div_FtsZ_CS	EMBL:FN595991	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0010020
GO:GO:0016043	GO:GO:0016787	InterPro:IPR036525	InterPro:IPR037103	EntrezGene:LOC100251032	wikigene:LOC100251032
HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS01135	PANTHER:PTHR30314
PANTHER:PTHR30314:SF14	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGR:TC65667
TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase
UniParc:UPI0001523D1C	ArrayExpress:VIT_08s0007g03390	EnsemblPlantsGene:VIT_08s0007g03390	EnsemblPlants:VIT_08s0007g03390.t01	unigene:Vvi.14384	RefSeq:XP_002282740
RefSeq:XP_002282740.1	RefSeq:XP_019077227.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:17343291..17356017

Molecular Weight (calculated)

51578.5 Da

IEP (calculated)

6.094

GRAVY (calculated)

-0.142

Length

486 amino acids

Sequence
(BLAST)

001: MATCMSSYFT PSDTRNQMEL LNVLGRRISL GNHQRRVNSL KMFDDKNEML GAGQRISSRL PQFKCSANSH SVSPYHSKDP FLDLHPEVSM LRGEGSSNVS
101: SPRKDASSGS VTESIRDSSG PSNYNEAKIK VIGVGGGGSN AVNRMIESSM QGVEFWIVNT DVQAMRMSPV YTEHRLQIGQ ELTRGLGAGG NPDIGMNAAK
201: ESKEAIEEAV YGADMVFVTA GMGGGTGTGG APVIAGVAKS MGILTVGIVT TPFSFEGRRR AVQAQEGIAA LRDSVDTLIV IPNDKLLTAV SQSTPVTEAF
301: NLADDILRQG VRGISDIIMI PGLVNVDFAD VRAIMANAGS SLMGIGTATG KTRARDAALN AIQSPLLDIG IERATGIVWN ITGGSDLTLF EVNAAAEVIY
401: DLVDPSANLI FGAVIDPSLS GQVSITLIAT GFKRQEENEG RPLQASQLAQ GDANFGMSRR PSFTEGGSVE IPEFLKKKGR SRYPRA

Best Arabidopsis Sequence Match ( AT2G36250.1 )
(BLAST)

001: MATYVSPCFT PSDSRLLTVL RKNVLPENHL GRLNSIRTID SKKNRVVVAA QKSESSPIRN SPRHYQSQAQ DPFLNLHPEI SMLRGEGTST IVNPRKETSS
101: GPVVEDFEEP SAPSNYNEAR IKVIGVGGGG SNAVNRMIES EMSGVEFWIV NTDIQAMRMS PVLPDNRLQI GKELTRGLGA GGNPEIGMNA ARESKEVIEE
201: ALYGSDMVFV TAGMGGGTGT GAAPVIAGIA KAMGILTVGI ATTPFSFEGR RRTVQAQEGL ASLRDNVDTL IVIPNDKLLT AVSQSTPVTE AFNLADDILR
301: QGVRGISDII TIPGLVNVDF ADVRAIMANA GSSLMGIGTA TGKSRARDAA LNAIQSPLLD IGIERATGIV WNITGGSDLT LFEVNAAAEV IYDLVDPTAN
401: LIFGAVVDPA LSGQVSITLI ATGFKRQEEG EGRTVQMVQA DAASVGATRR PSSSFRESGS VEIPEFLKKK GSSRYPRV

Arabidopsis Description

FTSZ2-1Cell division protein FtsZ homolog 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82533]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.