Factsheet for PGSC0003DMT400006855

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70774	Canola	cytosol, extracellular, plastid	76.6	40.6
CDY72626	Canola	cytosol, extracellular, plastid	76.6	40.45
CDX95369	Canola	extracellular, golgi, plastid	42.55	40.0
GSMUA_Achr6P13250_001	Banana	cytosol	78.01	32.07
VIT_08s0007g03390.t01	Wine grape	plastid	87.23	25.31
KRH67910	Soybean	plastid	84.4	25.05
KRG96197	Soybean	plastid	82.98	24.48
Bra006945.1-P	Field mustard	plastid	79.43	24.19
CDX78122	Canola	plastid	79.43	24.14
CDX73607	Canola	plastid	78.72	23.92
KRH32740	Soybean	plastid	81.56	23.76
AT3G52750.2	Thale cress	plastid	78.72	23.47
KRH20058	Soybean	plastid	78.72	22.84
CDY43739	Canola	plastid	76.6	22.64
Bra017252.1-P	Field mustard	plastid	76.6	22.64
AT2G36250.3	Thale cress	plastid	76.6	22.59
TraesCS1A01G276500.1	Wheat	plastid	71.63	21.35
TraesCS1D01G276000.1	Wheat	plastid	70.92	21.14
KXG22108	Sorghum	plastid	70.21	21.02
TraesCS1B01G285700.2	Wheat	plastid	70.21	20.93
Os05t0443800-01	Rice	plastid	66.67	19.92
HORVU1Hr1G073840.4	Barley	plastid	67.38	17.63
Zm00001d010135_P003	Maize	plastid	63.83	17.48
PGSC0003DMT400057147	Potato	plastid	35.46	11.93
PGSC0003DMT400033429	Potato	plastid	34.75	11.21
PGSC0003DMT400006854	Potato	cytosol	3.55	1.42

Protein Annotations

EnsemblPlants:PGSC0003DMT400006855	EnsemblPlantsGene:PGSC0003DMG402002661	Gene3D:3.30.1330.20	InterPro:FtsZ_C	InterPro:IPR037103	InterPro:Tub_FtsZ_C
InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	PANTHER:PTHR30314	PANTHER:PTHR30314:SF14	PFAM:PF12327	PGSC:PGSC0003DMG402002661
SMART:SM00865	SUPFAM:SSF55307	UniParc:UPI000296D036	UniProt:M0ZS27	MapMan:35.1	:

Description

FtsZ [Source:PGSC_GENE;Acc:PGSC0003DMG402002661]

Coordinates

chr9:+:3268985..3273075

Molecular Weight (calculated)

15158.1 Da

IEP (calculated)

6.898

GRAVY (calculated)

-0.175

Length

141 amino acids

Sequence
(BLAST)

001: MARGKTRARD AALNAIQSPL LDIGIERATG IVWNITGGSD LTLFEVNAAA EVIYDLVDPS ANLIFGAVID PSISGQVSIT LIATGFKRQE ESDMRPLQGN
101: QLAQGDTSLG TNRRPASFLE GGSVEIPEFL RKKGRSRYPR A

Best Arabidopsis Sequence Match ( AT3G52750.1 )
(BLAST)

001: MAAYVSPCLT PPDSRVLTVL RKSVLPDHHL GTRVGCLRMS EGTTKRYRVV ASHKYESSSI RNSLNSHSTS HFQSQDSFLN LHPEISMLNP RKETSSVPIT
101: EDLDELSTPN TYNEARIKVI GVGGGGSNAV NRMIESEMIG VEFWIVNTDI QAMRISPVFP DNRLQIGKEL TRGLGAGGNP EIGMNAATES KEAIQEALYG
201: SDMVFVTAGM GGGTGTGGAP IIAGVAKAMG ILTVGIVTTP FSFEGRRRAL QAQEGIAALR DNVDTLIVIP NDKLLAAVSQ STPVTEAFNL ADDILRQGVR
301: GISDIITIPG LVNVDFADVR AIMANAGSSL MGIGTATGKT RARDAALNAI QSPLLDIGIE RATGIVWNIT GGSDLTLFEV NAAAEVIYDL VDPTANLIFG
401: AVVDPSYSGQ ISITLIATGF KRQEEGEGRP LQATQADASM GATRRPSSSF TEGSSIEIPE FLKKKGRSRY PRL

Arabidopsis Description

FTSZ2-2Cell division protein FtsZ homolog 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXJ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.