Factsheet for PGSC0003DMT400057147

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400009646
PGSC0003DMT400057147

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	PGSC0003DMT400009646	AT5G42480.1	16146521
AT5G55280.1	PGSC0003DMT400009646	AT5G42480.1	19453460
AT5G55280.1	PGSC0003DMT400057147	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065050.2.1	Tomato	plastid	98.57	98.57
VIT_19s0090g01320.t01	Wine grape	cytosol	75.66	87.81
Bra035565.1-P	Field mustard	cytosol	74.46	85.95
HORVU2Hr1G109020.1	Barley	cytosol	51.55	82.44
Bra002918.1-P	Field mustard	plastid	78.76	80.29
CDY17316	Canola	plastid	78.52	80.05
CDY19897	Canola	plastid	78.52	80.05
CDY06595	Canola	plastid	78.28	77.18
CDY20776	Canola	plastid	78.28	77.18
KRG98668	Soybean	plastid	76.13	76.5
KRH46262	Soybean	plastid	75.42	75.78
KRH73828	Soybean	plastid	75.42	75.6
TraesCS2D01G488700.1	Wheat	plastid	72.55	75.43
KRH14302	Soybean	plastid	75.18	75.36
TraesCS2A01G488400.1	Wheat	plastid	72.31	75.19
TraesCS2B01G516000.1	Wheat	plastid	72.31	75.19
AT5G55280.1	Thale cress	plastid	77.57	75.06
GSMUA_Achr7P06230_001	Banana	plastid	73.03	73.91
Os04t0665400-01	Rice	plastid	70.88	73.88
EES13042	Sorghum	plastid	70.41	72.84
Zm00001d001939_P003	Maize	plastid	69.21	71.6
HORVU0Hr1G018830.1	Barley	cytosol, plastid	73.51	69.68
PGSC0003DMT400033429	Potato	plastid	72.55	69.57
PGSC0003DMT400006854	Potato	cytosol	36.75	43.87
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.45	42.44
PGSC0003DMT400006855	Potato	cytosol, mitochondrion, nucleus	11.93	35.46

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	ProteinID:AAT11924	ProteinID:AAT11924.1	EMBL:AY601110	InterPro:Cell_div_FtsZ
InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036525	UniProt:M1C0I4	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	EnsemblPlantsGene:PGSC0003DMG400022200
PGSC:PGSC0003DMG400022200	EnsemblPlants:PGSC0003DMT400057147	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135
PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307
TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase
UniParc:UPI000295BFCE	SEG:seg	:	:	:	:

Description

Plastid-dividing ring protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022200]

Coordinates

chr7:-:55192608..55199187

Molecular Weight (calculated)

44003.6 Da

IEP (calculated)

6.311

GRAVY (calculated)

0.023

Length

419 amino acids

Sequence
(BLAST)

001: MAILGLSNPA ELASSPSSSL TFSHRLHTSF IPKQCFFTGV RRKSFCRPQR FSISSSFTPM DSAKIKVVGV GGGGNNAVNR MIGSGLQGVD FYAINTDAQA
101: LVQSAAENPL QIGELLTRGL GTGGNPLLGE QAAEESKEAI ANSLKGSDMV FITAGMGGGT GSGAAPVVAQ IAKEAGYLTV GVVTYPFSFE GRKRSVQALE
201: AIEKLQRNVD TLIVIPNDRL LDIADEQTPL QDAFLLADDV LRQGVQGISD IITIPGLVNV DFADVKAVMK DSGTAMLGVG VSSSKNRAEE AAEQATLAPL
301: IGSSIQSATG VVYNITGGKD ITLQEVNRVS QVVTSLADPS ANIIFGAVVD ERYNGEIHVT IIATGFTQSF QKTLLSDPRG AKLLEKGSGI KESMASPVTL
401: RSSNSPSTTS RTPTRRLFF

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.