Factsheet for Bra035565.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002918.1-P
Bra015875.1-P
Bra033637.1-P
Bra035565.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	Bra015875.1-P	AT1G75010.1	17304239
AT5G55280.1	Bra033637.1-P	AT5G42480.1	16146521
AT5G55280.1	Bra033637.1-P	AT5G42480.1	19453460
AT5G55280.1	Bra002918.1-P	AT5G55280.1	16146521
AT5G55280.1	Bra035565.1-P	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g01320.t01	Wine grape	cytosol	88.43	88.92
CDY20776	Canola	plastid	98.9	84.47
CDY06595	Canola	plastid	98.35	84.0
Bra002918.1-P	Field mustard	plastid	92.56	81.75
AT5G55280.1	Thale cress	plastid	95.32	79.91
HORVU2Hr1G109020.1	Barley	cytosol	56.75	78.63
Solyc07g065050.2.1	Tomato	plastid	86.23	74.7
PGSC0003DMT400057147	Potato	plastid	85.95	74.46
KRG98668	Soybean	plastid	84.85	73.86
KRH73828	Soybean	plastid	84.85	73.68
KRH14302	Soybean	plastid	84.57	73.44
Os04t0665400-01	Rice	plastid	81.27	73.38
KRH46262	Soybean	plastid	83.2	72.42
EES13042	Sorghum	plastid	80.44	72.1
TraesCS2A01G488400.1	Wheat	plastid	79.61	71.71
TraesCS2B01G516000.1	Wheat	plastid	79.61	71.71
TraesCS2D01G488700.1	Wheat	plastid	79.61	71.71
GSMUA_Achr7P06230_001	Banana	plastid	81.54	71.5
Zm00001d001939_P003	Maize	plastid	79.61	71.36
HORVU0Hr1G018830.1	Barley	cytosol, plastid	79.89	65.61
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	31.13	41.7
Bra006945.1-P	Field mustard	plastid	50.96	39.96
Bra017252.1-P	Field mustard	plastid	51.52	39.2

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	EnsemblPlantsGene:Bra035565	EnsemblPlants:Bra035565.1	EnsemblPlants:Bra035565.1-P	InterPro:Cell_div_FtsZ
InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036525	UniProt:M4F3B5	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423
ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864
SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom
InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000254648D	SEG:seg	:

Description

AT5G55280 (E=9e-162) FTSZ1-1, ATFTSZ1-1, CPFTSZ | FTSZ1-1; protein binding / structural molecule

Coordinates

chrA02:+:7511293..7512818

Molecular Weight (calculated)

37974.4 Da

IEP (calculated)

5.029

GRAVY (calculated)

-0.009

Length

363 amino acids

Sequence
(BLAST)

001: METAKIKVVG VGGGGNNAVN RMISSGLQSV DFYAINTDSQ ALLQSSAQTP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG
101: TGSGAAPVVA QISKEAGYLT VGVVTYPFSF EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN
201: VDFADVKAVM KDSGTAMLGV GVSCGKNRAQ EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTRLADP SANIIFGAVV DDRYTGEIHV
301: TIIATGFSQS FQKTLLSDPR AAKLVDKMGS SGQQENKGMS LPHQRQSPAS INTKPSSPRR LFF

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.