Factsheet for Bra002918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002918.1-P
Bra015875.1-P
Bra033637.1-P
Bra035565.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	Bra015875.1-P	AT1G75010.1	17304239
AT5G55280.1	Bra033637.1-P	AT5G42480.1	16146521
AT5G55280.1	Bra033637.1-P	AT5G42480.1	19453460
AT5G55280.1	Bra002918.1-P	AT5G55280.1	16146521
AT5G55280.1	Bra035565.1-P	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17316	Canola	plastid	99.03	99.03
Bra035565.1-P	Field mustard	cytosol	81.75	92.56
VIT_19s0090g01320.t01	Wine grape	cytosol	77.37	88.09
AT5G55280.1	Thale cress	plastid	86.86	82.45
HORVU2Hr1G109020.1	Barley	cytosol	50.85	79.77
Solyc07g065050.2.1	Tomato	plastid	80.54	79.0
PGSC0003DMT400057147	Potato	plastid	80.29	78.76
KRH14302	Soybean	plastid	77.86	76.56
KRH73828	Soybean	plastid	77.86	76.56
KRH46262	Soybean	plastid	77.62	76.5
KRG98668	Soybean	plastid	76.64	75.54
GSMUA_Achr7P06230_001	Banana	plastid	75.67	75.12
Os04t0665400-01	Rice	plastid	72.99	74.63
TraesCS2A01G488400.1	Wheat	plastid	72.99	74.44
TraesCS2D01G488700.1	Wheat	plastid	72.99	74.44
TraesCS2B01G516000.1	Wheat	plastid	72.75	74.19
EES13042	Sorghum	plastid	72.75	73.83
Zm00001d001939_P003	Maize	plastid	71.78	72.84
HORVU0Hr1G018830.1	Barley	cytosol, plastid	73.24	68.1
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.98	42.44
Bra006945.1-P	Field mustard	plastid	47.45	42.12
Bra017252.1-P	Field mustard	plastid	48.18	41.51

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	EnsemblPlantsGene:Bra002918	EnsemblPlants:Bra002918.1	EnsemblPlants:Bra002918.1-P	InterPro:Cell_div_FtsZ
InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036525	UniProt:M4CFD6	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423
ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864
SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom
InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI00025442AC	SEG:seg	:

Description

AT5G55280 (E=5e-168) FTSZ1-1, ATFTSZ1-1, CPFTSZ | FTSZ1-1; protein binding / structural molecule

Coordinates

chrA10:-:6754259..6755907

Molecular Weight (calculated)

43167.3 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.074

Length

411 amino acids

Sequence
(BLAST)

001: MAISPLAQLN ELPISSSFLA TSHSLHSTRI NGGFSKQRPK PTRLRCSFSP MESARIKVVG VGGGGNNAVN RMISSGLQSV DFYAINTDSQ ALLQSSAHNP
101: LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF EGRKRSLQAL EAIEKLQKNV
201: DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE EAAEQATLAP LIGSSIQSAT
301: GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLSDPR AAKLLDKTGS SGQQQENKGS HQRQSPATIN
401: TKSSSPRRLF F

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.