Factsheet for TraesCS2D01G488700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G488400.1
TraesCS2B01G516000.1
TraesCS2D01G488700.1
TraesCS5A01G356200.1
TraesCS5B01G358700.1
TraesCS5D01G365000.1
TraesCS6A01G066200.3
TraesCS6B01G089500.2
TraesCSU01G117700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	TraesCS5A01G356200.1	AT1G75010.1	17304239
AT5G55280.1	TraesCS5B01G358700.1	AT1G75010.1	17304239
AT5G55280.1	TraesCS5D01G365000.1	AT1G75010.1	17304239
AT5G55280.1	TraesCS6A01G066200.3	AT5G42480.1	16146521
AT5G55280.1	TraesCS6B01G089500.2	AT5G42480.1	16146521
AT5G55280.1	TraesCSU01G117700.1	AT5G42480.1	16146521
AT5G55280.1	TraesCS6A01G066200.3	AT5G42480.1	19453460
AT5G55280.1	TraesCS6B01G089500.2	AT5G42480.1	19453460
AT5G55280.1	TraesCSU01G117700.1	AT5G42480.1	19453460
AT5G55280.1	TraesCS2A01G488400.1	AT5G55280.1	16146521
AT5G55280.1	TraesCS2B01G516000.1	AT5G55280.1	16146521
AT5G55280.1	TraesCS2D01G488700.1	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G488400.1	Wheat	plastid	98.76	98.76
TraesCS2B01G516000.1	Wheat	plastid	96.03	96.03
EES13042	Sorghum	plastid	88.34	87.9
Os04t0665400-01	Rice	plastid	86.85	87.06
Zm00001d001939_P003	Maize	plastid	86.85	86.42
HORVU0Hr1G018830.1	Barley	cytosol, plastid	92.8	84.62
VIT_19s0090g01320.t01	Wine grape	cytosol	73.7	82.27
Bra035565.1-P	Field mustard	cytosol	71.71	79.61
GSMUA_Achr7P06230_001	Banana	plastid	76.92	74.88
CDY19897	Canola	plastid	74.69	73.24
Bra002918.1-P	Field mustard	plastid	74.44	72.99
CDY17316	Canola	plastid	74.44	72.99
PGSC0003DMT400057147	Potato	plastid	75.43	72.55
Solyc07g065050.2.1	Tomato	plastid	74.94	72.08
CDY20776	Canola	plastid	74.44	70.59
KRH14302	Soybean	plastid	72.95	70.33
KRH73828	Soybean	plastid	72.95	70.33
KRH46262	Soybean	plastid	72.46	70.02
KRG98668	Soybean	plastid	72.21	69.78
CDY06595	Canola	plastid	73.45	69.65
AT5G55280.1	Thale cress	plastid	74.69	69.52
Solyc12g014560.1.1	Tomato	plastid	68.24	58.89
PGSC0003DMT400033429	Potato	plastid	61.79	56.98
TraesCS2D01G292200.1	Wheat	plastid	48.14	41.81
TraesCS1D01G276000.1	Wheat	plastid	46.15	39.32

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0007017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036525	HAMAP:MF_00909	PFAM:PF00091
PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135	PANTHER:PTHR30314
PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065
EnsemblPlantsGene:TraesCS2D01G488700	EnsemblPlants:TraesCS2D01G488700.1	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS
InterPro:Tubulin_FtsZ_GTPase	TIGR:cd02201	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:588133778..588136456

Molecular Weight (calculated)

42045.3 Da

IEP (calculated)

6.525

GRAVY (calculated)

0.027

Length

403 amino acids

Sequence
(BLAST)

001: MAPSTSSASA LLHLPGLPPR GPHRGGCRNH PRRPRHAAVR CSFAFAPVET ARIKVVGVGG GGNNAVNRMI GSGLQGIEFY AINTDSQALV NSQAQHPLQI
101: GEQLTRGLGT GGNPNLGEQA AEESKEVIAN ALRDSDLVFI TAGMGGGTGS GAAPVVAQIA KEAGYLTVGV VTYPFSFEGR KRSLQALEAL EKLERSVDTL
201: IVIPNDRLLD IADENMPLQD AFLLADDVLR QGVQGISDII TIPGLVNVDF ADVKAVMKNS GTAMLGVGVS SSKNRAQEAA EQATLAPLIG SSIEAATGVV
301: YNITGGKDIT LQEVNKVSQI VTSLADPSAN IIFGAVVDDR YNGEIHVTII ATGFPQSFQK SLLADPKGAR ILEAKEKVAS LATAAAAQQP AVAVPTWSRR
401: LFS

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.