Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G356200.1 | Wheat | plastid | 97.4 | 97.14 |
TraesCS5B01G358700.1 | Wheat | plastid | 97.4 | 97.14 |
HORVU5Hr1G088120.2 | Barley | plastid | 89.62 | 82.62 |
Os09t0555600-01 | Rice | plastid | 71.99 | 71.22 |
Zm00001d021407_P001 | Maize | plastid | 71.72 | 69.54 |
OQU89910 | Sorghum | plastid | 71.31 | 67.53 |
CDY37266 | Canola | mitochondrion | 4.37 | 47.06 |
VIT_01s0010g02140.t01 | Wine grape | mitochondrion | 36.34 | 38.22 |
Bra015875.1-P | Field mustard | plastid | 35.25 | 34.91 |
AT1G75010.1 | Thale cress | plastid | 35.11 | 34.68 |
KRH36043 | Soybean | plastid | 35.93 | 33.98 |
Solyc01g007880.2.1 | Tomato | plastid | 35.38 | 33.16 |
CDX73132 | Canola | plastid | 34.56 | 32.94 |
CDY64472 | Canola | endoplasmic reticulum, extracellular | 34.02 | 32.05 |
GSMUA_Achr2P03680_001 | Banana | nucleus | 46.04 | 29.72 |
CDY46020 | Canola | golgi | 0.14 | 5.88 |
Protein Annotations
MapMan:13.6.1.2.4 | Gene3D:2.20.110.10 | Gene3D:3.40.50.1440 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009536 |
GO:GO:0009570 | GO:GO:0009707 | GO:GO:0009987 | GO:GO:0010020 | GO:GO:0016020 | GO:GO:0016043 |
GO:GO:0035452 | GO:GO:0043621 | InterPro:IPR036525 | InterPro:MORN | PFAM:PF02493 | PANTHER:PTHR23084 |
SMART:SM00698 | SUPFAM:SSF52490 | SUPFAM:SSF82185 | EnsemblPlantsGene:TraesCS5D01G365000 | EnsemblPlants:TraesCS5D01G365000.1 | InterPro:Tubulin/FtsZ_GTPase_sf |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:442485794..442493778
Molecular Weight (calculated)
80903.7 Da
IEP (calculated)
6.380
GRAVY (calculated)
-0.307
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASVRGVLM VPLPPPLASP RRLALSPRRR RRRLPRVRAA AVEPVEVVGV GSRKDAVIDF CLGSRTLSST PIRFWTVHVD NSEVQFIPRI QDTETAVGVL
101: ERPLSLHPCP SAVIIVASAG QEADQIAALE LLSATKSADN LAASIFLKPF CFEGQRRQLE ASDLIVKFQA CSNFHIVIEA DSLLETEVET LAEALESANN
201: AVLSTISMIS IMMSGFNQMF WSSLDAQIKE VDPDEVGKLL KSYGEARVGF GAGYNVQSAI KQAVLHCPFL RGGIKDLNNV VFLSLTTSRV LAESDMISIL
301: HIFRRVTGFT KDIIFSRNSE PDLEPKLIVV SLLTIRNARD ENVASVKEGF LLSMALHFPF ISSLMGGDTQ ELRQARLNHS FSQLPDSGLS LADQGLPEHF
401: SVSNDATVSN LRSDKIENIK SERECDNSNG RIHPEFKEAN LESDGETSID VGREDPSSQQ ERNFWSNAFG IAQLWAKERT TTGRSNKRNE LDYITLPVGV
501: KSLEVQYDHS PNTQPETHNA TDSTPLSTGH AVSGTSLSGV GLEKVMEICS SAAAFLKGRM DKSRKRGSAA SRAASMLDAE REPEKTWSPI VEIQFGEGTY
601: RGRCQEGVPE GKGRLTYSDG SIYDGLWRYG KRSGLGTLYY SNGDVFHGTW RDDLIHGKGW YYFHSGDRWF ANFWKGKANG EGRFYAKDGS ILFGHFQNGW
701: RHGECLLIDG NGSRWLEVWD DGVLTGRTKL EE
101: ERPLSLHPCP SAVIIVASAG QEADQIAALE LLSATKSADN LAASIFLKPF CFEGQRRQLE ASDLIVKFQA CSNFHIVIEA DSLLETEVET LAEALESANN
201: AVLSTISMIS IMMSGFNQMF WSSLDAQIKE VDPDEVGKLL KSYGEARVGF GAGYNVQSAI KQAVLHCPFL RGGIKDLNNV VFLSLTTSRV LAESDMISIL
301: HIFRRVTGFT KDIIFSRNSE PDLEPKLIVV SLLTIRNARD ENVASVKEGF LLSMALHFPF ISSLMGGDTQ ELRQARLNHS FSQLPDSGLS LADQGLPEHF
401: SVSNDATVSN LRSDKIENIK SERECDNSNG RIHPEFKEAN LESDGETSID VGREDPSSQQ ERNFWSNAFG IAQLWAKERT TTGRSNKRNE LDYITLPVGV
501: KSLEVQYDHS PNTQPETHNA TDSTPLSTGH AVSGTSLSGV GLEKVMEICS SAAAFLKGRM DKSRKRGSAA SRAASMLDAE REPEKTWSPI VEIQFGEGTY
601: RGRCQEGVPE GKGRLTYSDG SIYDGLWRYG KRSGLGTLYY SNGDVFHGTW RDDLIHGKGW YYFHSGDRWF ANFWKGKANG EGRFYAKDGS ILFGHFQNGW
701: RHGECLLIDG NGSRWLEVWD DGVLTGRTKL EE
001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
Arabidopsis Description
ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.