Factsheet for TraesCS2D01G559100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G555400.1
TraesCS2B01G588400.1
TraesCS2D01G559100.1
TraesCS5A01G356200.1
TraesCS5B01G358700.1
TraesCS5D01G365000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19180.1	TraesCS5A01G356200.1	AT1G75010.1	19564892
AT3G19180.1	TraesCS5B01G358700.1	AT1G75010.1	19564892
AT3G19180.1	TraesCS5D01G365000.1	AT1G75010.1	19564892
AT3G19180.1	TraesCS2A01G555400.1	AT3G19180.1	19564892
AT3G19180.1	TraesCS2B01G588400.1	AT3G19180.1	19564892
AT3G19180.1	TraesCS2D01G559100.1	AT3G19180.1	19564892

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G119920.8	Barley	cytosol	85.63	96.14
TraesCS2A01G555400.1	Wheat	plastid	90.54	90.65
TraesCS2B01G588400.1	Wheat	plastid	90.79	90.01
HORVU6Hr1G028890.1	Barley	cytosol	9.58	87.64
HORVU7Hr1G022620.1	Barley	cytosol	9.34	85.39
HORVU6Hr1G023350.1	Barley	cytosol	9.34	85.39
HORVU5Hr1G017780.1	Barley	cytosol	9.34	85.39
HORVU5Hr1G052680.1	Barley	cytosol	9.09	85.06
HORVU5Hr1G052700.1	Barley	cytosol	9.09	85.06
HORVU1Hr1G043130.1	Barley	cytosol	9.21	84.27
HORVU4Hr1G064930.1	Barley	cytosol	9.09	83.15
EES13095	Sorghum	plastid	73.83	75.31
Zm00001d001844_P001	Maize	plastid	73.46	74.75
GSMUA_Achr1P15150_001	Banana	plastid	51.35	50.61
VIT_17s0053g00090.t01	Wine grape	plastid	49.14	48.54
Solyc03g098610.2.1	Tomato	cytosol	48.89	47.95
GSMUA_Achr3P14180_001	Banana	mitochondrion	49.02	47.9
PGSC0003DMT400026299	Potato	cytosol	48.65	47.71
AT3G19180.1	Thale cress	plastid	46.81	46.52
Bra022392.1-P	Field mustard	plasma membrane, plastid	45.33	45.72
CDX92306	Canola	plasma membrane	45.21	45.71
CDX99260	Canola	plastid	44.96	45.47
KRH09390	Soybean	plasma membrane, plastid	44.35	44.46
KRH38887	Soybean	plastid	44.1	44.21
Os04t0675700-00	Rice	cytosol	3.19	20.0

Protein Annotations

EnsemblPlants:TraesCS2D01G559100.1	EnsemblPlantsGene:TraesCS2D01G559100	InterPro:DUF4101	PANTHER:PTHR33925	PANTHER:PTHR33925:SF2	PFAM:PF13355
SEG:seg	SignalP:SignalP-noTM	MapMan:13.6.1.2.6	:	:	:

Description

No Description!

Coordinates

chr2D:-:631936672..631941426

Molecular Weight (calculated)

88556.0 Da

IEP (calculated)

6.526

GRAVY (calculated)

-0.268

Length

814 amino acids

Sequence
(BLAST)

001: MPTAAAALLH PSSAVAVAVA VAAPSPSTSS SARRSAPSSS SARRGGNASA GRGAAVRARV AGAAAPVTAA AAEGCGRQEP HSAPAVEIPV TCYQILGVTE
101: KAEKDEIVKS AIELRKSEIE DGYTEEVSTC RQALLLDVRD KLLFEQEYAG STRAKVPPRS SLHIPWSWLP AALCVLQEVG EEKLVLDIGQ AALRRADSKP
201: YVHDVLLAMA LAECSIAKAS FEKSKVSLGF EALARAQYLL RKKPSLEKMP LLEQIEESLE ELAPACTLEV LSLPRTPENS ERRRGAIAAL CELLGQGLDV
301: ESSCRVHDWP YFLGQAMDKL LATEIVELLS WDSLATTRKN KKSLESQSQR VVVDFDCFYR AMLAHLASGF STRQTDLISK AKTICECLVA SENTDLKFEE
401: SFCSFLLGEE SGATVFEKLQ QLQSNGSSNS RNYGLAKKKD SSDKVTVNQS LELWLKEVAL SRFADTRDCP PSLANFFAAP KRLISTSKQK LGATRRVLLS
501: SQTSPSANTC NRTSGQQNPR LNSTSHLGEA VKQLAPTTLG GQGHSSTDRP VNGLSTTSVP LKRNPGSHPV RTLESWGLTG DVIGKIAYTA VLGVALFGTL
601: KLLRFQFGNT KPAPSTRESA ATSSLNEAST SDGSFISIRV REQFEKLSKM LWLNNRLHSR SERSDLSPGS SDVAAIARKE RMSLQEAEAL VKQWQDIKSE
701: ALGPDYEIDM LSEVLDGSML SKWQDLALSA KDQSCYWRFV LLNLSVVRAE ILLDEAGDGE VAEIDAVLEE AAELVDDSQP KKPSYYSTYE VQYTLRRQDD
801: RSWKICEAAV RDLS

Best Arabidopsis Sequence Match ( AT3G19180.1 )
(BLAST)

001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK

Arabidopsis Description

CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.