Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022392.1-P | Field mustard | plasma membrane, plastid | 79.37 | 80.55 |
| CDX92306 | Canola | plasma membrane | 77.9 | 79.25 |
| CDX99260 | Canola | plastid | 77.78 | 79.13 |
| VIT_17s0053g00090.t01 | Wine grape | plastid | 56.17 | 55.83 |
| HORVU6Hr1G028890.1 | Barley | cytosol | 5.98 | 55.06 |
| HORVU5Hr1G017780.1 | Barley | cytosol | 5.98 | 55.06 |
| HORVU7Hr1G022620.1 | Barley | cytosol | 5.86 | 53.93 |
| PGSC0003DMT400026299 | Potato | cytosol | 53.72 | 53.01 |
| HORVU1Hr1G043130.1 | Barley | cytosol | 5.74 | 52.81 |
| Solyc03g098610.2.1 | Tomato | cytosol | 53.11 | 52.41 |
| HORVU5Hr1G052680.1 | Barley | cytosol | 5.49 | 51.72 |
| HORVU5Hr1G052700.1 | Barley | cytosol | 5.49 | 51.72 |
| HORVU6Hr1G023350.1 | Barley | cytosol | 5.62 | 51.69 |
| HORVU4Hr1G064930.1 | Barley | cytosol | 5.62 | 51.69 |
| HORVU2Hr1G119920.8 | Barley | cytosol | 44.32 | 50.07 |
| KRH38887 | Soybean | plastid | 49.45 | 49.88 |
| KRH09390 | Soybean | plasma membrane, plastid | 49.33 | 49.75 |
| TraesCS2A01G555400.1 | Wheat | plastid | 47.01 | 47.36 |
| TraesCS2B01G588400.1 | Wheat | plastid | 47.37 | 47.26 |
| GSMUA_Achr1P15150_001 | Banana | plastid | 47.5 | 47.09 |
| EES13095 | Sorghum | plastid | 45.67 | 46.87 |
| TraesCS2D01G559100.1 | Wheat | plastid | 46.52 | 46.81 |
| Zm00001d001844_P001 | Maize | plastid | 44.69 | 45.75 |
| GSMUA_Achr3P14180_001 | Banana | mitochondrion | 43.83 | 43.1 |
| AT5G42480.1 | Thale cress | plastid | 18.56 | 18.98 |
| Os04t0675700-00 | Rice | cytosol | 2.56 | 16.15 |
Protein Annotations
| MapMan:13.6.1.2.6 | PDB:5U9L | PDB:5U9O | EntrezGene:821452 | UniProt:A0A178VBN5 | ProteinID:AEE76203.1 |
| ProteinID:AEE76204.1 | Symbol:ARC6H | ArrayExpress:AT3G19180 | EnsemblPlantsGene:AT3G19180 | RefSeq:AT3G19180 | TAIR:AT3G19180 |
| RefSeq:AT3G19180-TAIR-G | EnsemblPlants:AT3G19180.1 | TAIR:AT3G19180.1 | EMBL:AY074283 | Unigene:At.42679 | ProteinID:BAB02958.1 |
| ncoils:Coil | InterPro:DUF4101 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009528 |
| GO:GO:0009536 | GO:GO:0009706 | GO:GO:0009987 | GO:GO:0010020 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0043572 | GO:GO:0043621 | RefSeq:NP_001030725.1 | RefSeq:NP_188549.2 | ProteinID:OAP03767.1 |
| PFAM:PF13355 | PO:PO:0000293 | PO:PO:0009025 | PO:PO:0020030 | PANTHER:PTHR33925 | PANTHER:PTHR33925:SF2 |
| UniProt:Q8VY16 | UniParc:UPI000016345F | SEG:seg | : | : | : |
Description
CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
Coordinates
chr3:+:6632637..6637292
Molecular Weight (calculated)
90827.8 Da
IEP (calculated)
6.366
GRAVY (calculated)
-0.210
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.