Factsheet for HORVU6Hr1G023350.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G043130.1
HORVU2Hr1G119920.8
HORVU4Hr1G064930.1
HORVU5Hr1G017780.1
HORVU5Hr1G052680.1
HORVU5Hr1G052700.1
HORVU5Hr1G088120.2
HORVU6Hr1G023350.1
HORVU6Hr1G028890.1
HORVU7Hr1G022620.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19180.1	HORVU5Hr1G088120.2	AT1G75010.1	19564892
AT3G19180.1	HORVU1Hr1G043130.1	AT3G19180.1	19564892
AT3G19180.1	HORVU2Hr1G119920.8	AT3G19180.1	19564892
AT3G19180.1	HORVU4Hr1G064930.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G017780.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G052680.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G052700.1	AT3G19180.1	19564892
AT3G19180.1	HORVU6Hr1G023350.1	AT3G19180.1	19564892
AT3G19180.1	HORVU6Hr1G028890.1	AT3G19180.1	19564892
AT3G19180.1	HORVU7Hr1G022620.1	AT3G19180.1	19564892

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G028890.1	Barley	cytosol	95.51	95.51
HORVU5Hr1G052700.1	Barley	cytosol	92.13	94.25
HORVU5Hr1G052680.1	Barley	cytosol	92.13	94.25
HORVU7Hr1G022620.1	Barley	cytosol	93.26	93.26
HORVU5Hr1G017780.1	Barley	cytosol	93.26	93.26
HORVU4Hr1G064930.1	Barley	cytosol	92.13	92.13
HORVU1Hr1G043130.1	Barley	cytosol	92.13	92.13
HORVU2Hr1G119920.8	Barley	cytosol	84.27	10.34
TraesCS2A01G555400.1	Wheat	plastid	87.64	9.59
TraesCS2B01G588400.1	Wheat	plastid	86.52	9.38
TraesCS2D01G559100.1	Wheat	plastid	85.39	9.34
EES13095	Sorghum	plastid	71.91	8.02
Zm00001d001844_P001	Maize	plastid	71.91	8.0
GSMUA_Achr1P15150_001	Banana	plastid	59.55	6.42
GSMUA_Achr3P14180_001	Banana	mitochondrion	56.18	6.0
KRH09390	Soybean	plasma membrane, plastid	53.93	5.91
KRH38887	Soybean	plastid	53.93	5.91
PGSC0003DMT400026299	Potato	cytosol	53.93	5.78
Solyc03g098610.2.1	Tomato	cytosol	53.93	5.78
CDX99260	Canola	plastid	51.69	5.71
CDX92306	Canola	plasma membrane	51.69	5.71
Bra022392.1-P	Field mustard	plasma membrane, plastid	51.69	5.7
AT3G19180.1	Thale cress	plastid	51.69	5.62
VIT_17s0053g00090.t01	Wine grape	plastid	51.69	5.58
Os04t0675700-00	Rice	cytosol	4.49	3.08
HORVU6Hr1G012020.11	Barley	nucleus	20.22	2.19

Protein Annotations

EnsemblPlants:HORVU6Hr1G023350.1	EnsemblPlantsGene:HORVU6Hr1G023350	PANTHER:PTHR33925	PANTHER:PTHR33925:SF2	UniParc:UPI000B47ECD4	UniProt:A0A287TLD6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:77290846..77291223

Molecular Weight (calculated)

10064.1 Da

IEP (calculated)

8.074

GRAVY (calculated)

-0.436

Length

89 amino acids

Sequence
(BLAST)

1: RRTRRCVSVT EKAEKDKIVK SAIELRKSEI EDGYTEEVST CTHALLLDVR DKLLFEQEYA GSTRAKVPPR SSLHIPWSGL PAALCVLHE

Best Arabidopsis Sequence Match ( AT3G19180.1 )
(BLAST)

001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK

Arabidopsis Description

CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.