Factsheet for HORVU1Hr1G043130.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G043130.1
HORVU2Hr1G119920.8
HORVU4Hr1G064930.1
HORVU5Hr1G017780.1
HORVU5Hr1G052680.1
HORVU5Hr1G052700.1
HORVU5Hr1G088120.2
HORVU6Hr1G023350.1
HORVU6Hr1G028890.1
HORVU7Hr1G022620.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19180.1	HORVU5Hr1G088120.2	AT1G75010.1	19564892
AT3G19180.1	HORVU1Hr1G043130.1	AT3G19180.1	19564892
AT3G19180.1	HORVU2Hr1G119920.8	AT3G19180.1	19564892
AT3G19180.1	HORVU4Hr1G064930.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G017780.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G052680.1	AT3G19180.1	19564892
AT3G19180.1	HORVU5Hr1G052700.1	AT3G19180.1	19564892
AT3G19180.1	HORVU6Hr1G023350.1	AT3G19180.1	19564892
AT3G19180.1	HORVU6Hr1G028890.1	AT3G19180.1	19564892
AT3G19180.1	HORVU7Hr1G022620.1	AT3G19180.1	19564892

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G028890.1	Barley	cytosol	96.63	96.63
HORVU5Hr1G052680.1	Barley	cytosol	93.26	95.4
HORVU5Hr1G052700.1	Barley	cytosol	93.26	95.4
HORVU7Hr1G022620.1	Barley	cytosol	94.38	94.38
HORVU5Hr1G017780.1	Barley	cytosol	94.38	94.38
HORVU4Hr1G064930.1	Barley	cytosol	92.13	92.13
HORVU6Hr1G023350.1	Barley	cytosol	92.13	92.13
HORVU2Hr1G119920.8	Barley	cytosol	83.15	10.21
TraesCS2A01G555400.1	Wheat	plastid	86.52	9.47
TraesCS2B01G588400.1	Wheat	plastid	85.39	9.26
TraesCS2D01G559100.1	Wheat	plastid	84.27	9.21
EES13095	Sorghum	plastid	71.91	8.02
Zm00001d001844_P001	Maize	plastid	71.91	8.0
GSMUA_Achr1P15150_001	Banana	plastid	59.55	6.42
KRH09390	Soybean	plasma membrane, plastid	55.06	6.03
KRH38887	Soybean	plastid	55.06	6.03
GSMUA_Achr3P14180_001	Banana	mitochondrion	56.18	6.0
PGSC0003DMT400026299	Potato	cytosol	55.06	5.9
Solyc03g098610.2.1	Tomato	cytosol	55.06	5.9
CDX99260	Canola	plastid	52.81	5.84
CDX92306	Canola	plasma membrane	52.81	5.84
Bra022392.1-P	Field mustard	plasma membrane, plastid	52.81	5.82
AT3G19180.1	Thale cress	plastid	52.81	5.74
VIT_17s0053g00090.t01	Wine grape	plastid	52.81	5.7
Os04t0675700-00	Rice	cytosol	5.62	3.85
HORVU6Hr1G012020.11	Barley	nucleus	22.47	2.43

Protein Annotations

EnsemblPlants:HORVU1Hr1G043130.1	EnsemblPlantsGene:HORVU1Hr1G043130	PANTHER:PTHR33925	PANTHER:PTHR33925:SF2	UniParc:UPI000B47A9D3	UniProt:A0A287FBB0
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:313521325..313521702

Molecular Weight (calculated)

10223.4 Da

IEP (calculated)

8.895

GRAVY (calculated)

-0.427

Length

89 amino acids

Sequence
(BLAST)

1: RRTRRCVSVT EKAEKDKIIK SSIELRKLEI EDGYTEEVST CRHALLLDVR DKLLFGQEYA GSTRAKVPPR SSLHIPWSWL PAALCVLQE

Best Arabidopsis Sequence Match ( AT3G19180.2 )
(BLAST)

001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQVT VSIHLLLFLY LIMLVYYS

Arabidopsis Description

CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.