Factsheet for Zm00001d001844_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001844_P001
Zm00001d021407_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19180.1	Zm00001d021407_P001	AT1G75010.1	19564892
AT3G19180.1	Zm00001d001844_P001	AT3G19180.1	19564892

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13095	Sorghum	plastid	89.62	89.85
HORVU2Hr1G119920.8	Barley	cytosol	71.88	79.31
TraesCS2B01G588400.1	Wheat	plastid	76.25	74.3
HORVU6Hr1G028890.1	Barley	cytosol	8.25	74.16
TraesCS2A01G555400.1	Wheat	plastid	75.0	73.8
TraesCS2D01G559100.1	Wheat	plastid	74.75	73.46
HORVU7Hr1G022620.1	Barley	cytosol	8.12	73.03
HORVU5Hr1G017780.1	Barley	cytosol	8.12	73.03
HORVU1Hr1G043130.1	Barley	cytosol	8.0	71.91
HORVU6Hr1G023350.1	Barley	cytosol	8.0	71.91
HORVU5Hr1G052680.1	Barley	cytosol	7.75	71.26
HORVU5Hr1G052700.1	Barley	cytosol	7.75	71.26
HORVU4Hr1G064930.1	Barley	cytosol	7.88	70.79
GSMUA_Achr1P15150_001	Banana	plastid	52.0	50.36
VIT_17s0053g00090.t01	Wine grape	plastid	49.5	48.06
Solyc03g098610.2.1	Tomato	cytosol	49.12	47.35
PGSC0003DMT400026299	Potato	cytosol	49.0	47.23
GSMUA_Achr3P14180_001	Banana	mitochondrion	49.0	47.06
Bra022392.1-P	Field mustard	plasma membrane, plastid	45.62	45.23
CDX92306	Canola	plasma membrane	45.5	45.22
CDX99260	Canola	plastid	45.38	45.09
AT3G19180.1	Thale cress	plastid	45.75	44.69
KRH09390	Soybean	plasma membrane, plastid	45.0	44.34
KRH38887	Soybean	plastid	44.88	44.21
Os04t0675700-00	Rice	cytosol	3.12	19.23
Zm00001d053923_P003	Maize	plastid	20.12	16.1

Protein Annotations

MapMan:13.6.1.2.6	UniProt:A0A1D6DTH0	InterPro:DUF4101	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507
GO:GO:0009528	GO:GO:0009536	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043
GO:GO:0043572	GO:GO:0043621	ProteinID:ONM12159.1	PFAM:PF13355	PANTHER:PTHR33925	PANTHER:PTHR33925:SF2
UniParc:UPI0002210146	EnsemblPlantsGene:Zm00001d001844	EnsemblPlants:Zm00001d001844_P001	EnsemblPlants:Zm00001d001844_T001	SEG:seg	:

Description

Plastid division protein CDP1 chloroplastic

Coordinates

chr2:+:1713365..1718096

Molecular Weight (calculated)

87532.8 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.200

Length

800 amino acids

Sequence
(BLAST)

001: MVMPTVASAA AAALHPAIST RRAGVVGNGI ASAAAAGGRL AGGGRGAVVR ARVAEAAPVA AEGGRLEAPP AAPMVEIPVT CYQMLGVTEK AEKDEIVKAA
101: MELKNAGIED GYTAEVSTFR QALLVDVRDK LLFEQDYAGN IKEKVPPRSS LHIPWSWLPA ALCILQEVGE EKLVLEIGQA ALRRPDSKPY VHDVLLAMAL
201: AECSIAKASF EKSKVSLGFE ALARAQYLLR RKPSLEKMPI LEQIEESLEE LAPACTLELL SLPQTLENSE RRRGAIAALC ELLRQGLDVE SSCRVHDWPC
301: FLGQAMDKLL ANEIVDLLTW DTLATTRKNK RSLESQSQRV VVDFNCFYMA MLAHLAFGFT TRQTELIKKA KTICECLVAS ESTDLKFEES FCSYLLGEET
401: GTTVFEKLQQ LQSTGSSNSK NYGLDKKKDS SGKVTVNQSL ELWLKDVALS RFADTKDCPP SLTNFFGAPK RVLNTSKQKL GSPRSVLLSS QPSSSASLCN
501: RTSTEQSPRL SPNSHLGEAV KQLAPANLGL QSSMDRQVNG SGTASVPLKR NPGSHIRTLE LWGLSGDVMG KLACSALLGF VVFSTLKLTR FQFGHVRYTD
601: PSRESASMLS LNEASAKEGS FITSRVRKHF ENISKFLWLS DRPNSNSKGS DKHPAVNDIT AAVCKQKMDI QEAETLVKQW QDIKSEALGP DYQTDMLPEI
701: LDGSMLSKWE DLALLAKDQS CYWRFVLLNL NVVRAEIILD EIGAGEAAEI DAVLEEAAEL VDDSQPKKPS YYSTYEVQYV LRRQNDGSWK ISEAAVRDLT

Best Arabidopsis Sequence Match ( AT3G19180.1 )
(BLAST)

001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK

Arabidopsis Description

CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.