CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13095
OQU89910

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19180.1	OQU89910	AT1G75010.1	19564892
AT3G19180.1	EES13095	AT3G19180.1	19564892

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001844_P001	Maize	plastid	89.85	89.62
HORVU2Hr1G119920.8	Barley	cytosol	72.68	80.0
HORVU6Hr1G028890.1	Barley	cytosol	8.27	74.16
TraesCS2B01G588400.1	Wheat	plastid	76.07	73.93
TraesCS2A01G555400.1	Wheat	plastid	75.31	73.92
TraesCS2D01G559100.1	Wheat	plastid	75.31	73.83
HORVU7Hr1G022620.1	Barley	cytosol	8.15	73.03
HORVU5Hr1G017780.1	Barley	cytosol	8.15	73.03
HORVU6Hr1G023350.1	Barley	cytosol	8.02	71.91
HORVU1Hr1G043130.1	Barley	cytosol	8.02	71.91
HORVU5Hr1G052680.1	Barley	cytosol	7.77	71.26
HORVU5Hr1G052700.1	Barley	cytosol	7.77	71.26
HORVU4Hr1G064930.1	Barley	cytosol	7.89	70.79
GSMUA_Achr1P15150_001	Banana	plastid	52.38	50.61
VIT_17s0053g00090.t01	Wine grape	plastid	50.38	48.79
Solyc03g098610.2.1	Tomato	cytosol	50.25	48.31
PGSC0003DMT400026299	Potato	cytosol	50.0	48.07
GSMUA_Achr3P14180_001	Banana	mitochondrion	49.25	47.18
Bra022392.1-P	Field mustard	plasma membrane, plastid	46.49	45.97
CDX92306	Canola	plasma membrane	46.37	45.96
CDX99260	Canola	plastid	46.24	45.84
AT3G19180.1	Thale cress	plastid	46.87	45.67
KRH09390	Soybean	plasma membrane, plastid	45.86	45.07
KRH38887	Soybean	plastid	45.49	44.7
EES06197	Sorghum	plastid	20.93	21.92
Os04t0675700-00	Rice	cytosol	3.26	20.0

Protein Annotations

MapMan:13.6.1.2.6	EntrezGene:8085862	UniProt:C5YAH5	ncoils:Coil	InterPro:DUF4101	EnsemblPlants:EES13095
ProteinID:EES13095	ProteinID:EES13095.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009528
GO:GO:0009536	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0043572
GO:GO:0043621	PFAM:PF13355	PANTHER:PTHR33925	PANTHER:PTHR33925:SF2	EnsemblPlantsGene:SORBI_3006G265800	UniParc:UPI0001A875EC
RefSeq:XP_002448767.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:59963422..59968098

Molecular Weight (calculated)

87088.0 Da

IEP (calculated)

6.187

GRAVY (calculated)

-0.211

Length

798 amino acids

Sequence
(BLAST)

001: MVMPTMASAA AAALHPAVST RRAGVGNGNA SSLAAGGRLA GGGRGPALRA RVAEAAPVAA EGGRQEAHPA VSMVEIPVTC YQMLGVTEKA EKDEIVKAAM
101: ELKIAGIEDG YTAEVSTFRQ ALLVDVRDKL LFEQDYAGNI KEKVPPRSSL HIPWSWLPAA LCILQEVGEE KLVLEIGQAA LRRPDSKPYV HDVLLAMALA
201: ECSIAKASFE KSKVSLGFEA LARAQYLLRR KPSLEKMPLL QQIEESLEEL APACTLELLS LPQTPENSER RQGAIAALCE LLRQGLDVES SCRVHDWPCF
301: LGQAMDKLLA TEIVDLLSWD TLATTRKNKR SLESQSQRVV VDFNCFYMAM LAHLAFGFTT RQTELIKKAK TICECLVASE STDLKFEESF CSYLLGEETG
401: TTVFEKLQQL QSTGSSNSKN YGLDKKKGSS DRVTVNQSLE LWLKDVALSR FADTKDCPPS LTNFFGAPKR VLNTSKQKLG SPRSVLLSSQ PSSSASACNR
501: TSAEQTPRLS PNSHLGEAVK QLAPANLGLQ SSMDRQVNGS GTASVPLKRN PGSHLRTLEL WGLSGDVIGK LAYSALLGFV VFSTLKLVKF QFGHVRYTNP
601: SRESASVSSL NEASASEGSF ITSGVRKHFE NLSKLLWLSR LNSNSGESDK HPAANDITAA VCKQKMDIQE AEALVKQWQD IKSEALGPDY QTDMLPEILD
701: GSMLSKWQDL ALLAKDQSCY WRFVLLNLNV VRAEITLDEV GAGEAAEIDA VLEEAAELVD DSQPKKPSYY STYEVQYVLR RQNDGSWKIS EAAVRDLT

Best Arabidopsis Sequence Match ( AT3G19180.1 )
(BLAST)

001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK

Arabidopsis Description

CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.