Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
- mitochondrion 1
- plasma membrane 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G19180.1 | KRH36043 | AT1G75010.1 | 19564892 |
| AT3G19180.1 | KRH09390 | AT3G19180.1 | 19564892 |
| AT3G19180.1 | KRH38887 | AT3G19180.1 | 19564892 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09390 | Soybean | plasma membrane, plastid | 94.7 | 94.7 |
| HORVU6Hr1G028890.1 | Barley | cytosol | 6.28 | 57.3 |
| HORVU7Hr1G022620.1 | Barley | cytosol | 6.16 | 56.18 |
| HORVU1Hr1G043130.1 | Barley | cytosol | 6.03 | 55.06 |
| HORVU4Hr1G064930.1 | Barley | cytosol | 6.03 | 55.06 |
| HORVU5Hr1G017780.1 | Barley | cytosol | 6.03 | 55.06 |
| VIT_17s0053g00090.t01 | Wine grape | plastid | 55.79 | 54.98 |
| HORVU5Hr1G052680.1 | Barley | cytosol | 5.79 | 54.02 |
| HORVU5Hr1G052700.1 | Barley | cytosol | 5.79 | 54.02 |
| HORVU6Hr1G023350.1 | Barley | cytosol | 5.91 | 53.93 |
| Solyc03g098610.2.1 | Tomato | cytosol | 54.06 | 52.89 |
| PGSC0003DMT400026299 | Potato | cytosol | 53.2 | 52.05 |
| Bra022392.1-P | Field mustard | plasma membrane, plastid | 51.6 | 51.92 |
| CDX99260 | Canola | plastid | 51.11 | 51.55 |
| CDX92306 | Canola | plasma membrane | 50.99 | 51.43 |
| AT3G19180.1 | Thale cress | plastid | 49.88 | 49.45 |
| HORVU2Hr1G119920.8 | Barley | cytosol | 42.86 | 48.0 |
| GSMUA_Achr1P15150_001 | Banana | plastid | 47.54 | 46.73 |
| EES13095 | Sorghum | plastid | 44.7 | 45.49 |
| Zm00001d001844_P001 | Maize | plastid | 44.21 | 44.88 |
| TraesCS2D01G559100.1 | Wheat | plastid | 44.21 | 44.1 |
| TraesCS2A01G555400.1 | Wheat | plastid | 44.09 | 44.03 |
| TraesCS2B01G588400.1 | Wheat | plastid | 44.34 | 43.85 |
| GSMUA_Achr3P14180_001 | Banana | mitochondrion | 44.58 | 43.46 |
| KRH17386 | Soybean | plastid | 20.44 | 20.91 |
| KRH05905 | Soybean | plastid | 20.07 | 20.27 |
| Os04t0675700-00 | Rice | cytosol | 2.09 | 13.08 |
Protein Annotations
| EMBL:ACUP02005885 | EnsemblPlants:KRH38887 | EnsemblPlantsGene:GLYMA_09G164700 | EntrezGene:100801086 | InterPro:DUF4101 | ncoils:Coil |
| PANTHER:PTHR33925 | PANTHER:PTHR33925:SF7 | PFAM:PF13355 | ProteinID:KRH38887 | ProteinID:KRH38887.1 | SEG:seg |
| UniParc:UPI0002338B7E | UniProt:I1L3V4 | MapMan:13.6.1.2.6 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:38873039..38879162
Molecular Weight (calculated)
90052.2 Da
IEP (calculated)
7.115
GRAVY (calculated)
-0.232
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFTYAAPIA PSLYGIARIG YCDQKVSLAG SPGEVNTSLF CVSSHAGKSD VLFERRKLKS ADTRIAENTQ MKSSVEIEIP VSCYQLIGVP DRAEKDEIVK
101: AVMGLKNAEI DEGYTIDVVT ARQDLLMDVR DKLLFEPEYA GNLREKIPPK SSLQIRWSWL PGALCLLQEV GESKLVLEIG QTSLQHQNAK PYTDDLILSM
201: ALAECAVAKI GFEKKKVSQG FEALARAQCL LRSKPSLAKM TLLSQIEESL EELAPACTLE LLSMPHAPEN VDRRRGAILA LRELLRQGLD VETSCQVQDW
301: PSFLSQAFDS LLAKEIVDLL PWDNLAVMRK NKKTIESQNL RAVIDSNCFY RVFKAHMAIG FSSKQKELIN KAKGICECLI ASEGIDLKFE EAFCLFLLGQ
401: GTEAEVVEKL KQLELNSNPK HNSVLGKAII DASTVNPSLE MWLKDSVLAL YPDTKDCSPA LANFFNAQQK FSGSKNSKGA QQMLPTICHR PLSSSGSLER
501: REVEESRSYM SSSPSLGFAV KQLTPTDLRS SLLSGRNETG SNTIESPVQV KRNLGSHRNS GIWHGYFPQG HIFKRITYLT VLGCIAFASI KLSGIGLSKT
601: LTASHWASTK ANDNIAWTAD SADYPVGPAY IRQSTMTNKL KRILSMFKIQ RLHQSGAGNH SDLHTTLTSS SSPINVSRRP MPVEEAETIV RQWQTIKAEA
701: LGPCHEVNCL AQVLDESMLA QWKGLANAAK ERSCYWRFLL LKLSIIRADI LSDGNGDDMA EIEALLEEAS ELVDGSQQKN PNYYLTYKVK YVMKRQDDGS
801: WKFCENDIIE SP
101: AVMGLKNAEI DEGYTIDVVT ARQDLLMDVR DKLLFEPEYA GNLREKIPPK SSLQIRWSWL PGALCLLQEV GESKLVLEIG QTSLQHQNAK PYTDDLILSM
201: ALAECAVAKI GFEKKKVSQG FEALARAQCL LRSKPSLAKM TLLSQIEESL EELAPACTLE LLSMPHAPEN VDRRRGAILA LRELLRQGLD VETSCQVQDW
301: PSFLSQAFDS LLAKEIVDLL PWDNLAVMRK NKKTIESQNL RAVIDSNCFY RVFKAHMAIG FSSKQKELIN KAKGICECLI ASEGIDLKFE EAFCLFLLGQ
401: GTEAEVVEKL KQLELNSNPK HNSVLGKAII DASTVNPSLE MWLKDSVLAL YPDTKDCSPA LANFFNAQQK FSGSKNSKGA QQMLPTICHR PLSSSGSLER
501: REVEESRSYM SSSPSLGFAV KQLTPTDLRS SLLSGRNETG SNTIESPVQV KRNLGSHRNS GIWHGYFPQG HIFKRITYLT VLGCIAFASI KLSGIGLSKT
601: LTASHWASTK ANDNIAWTAD SADYPVGPAY IRQSTMTNKL KRILSMFKIQ RLHQSGAGNH SDLHTTLTSS SSPINVSRRP MPVEEAETIV RQWQTIKAEA
701: LGPCHEVNCL AQVLDESMLA QWKGLANAAK ERSCYWRFLL LKLSIIRADI LSDGNGDDMA EIEALLEEAS ELVDGSQQKN PNYYLTYKVK YVMKRQDDGS
801: WKFCENDIIE SP
001: MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK
101: QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
201: RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
301: LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
401: VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
501: HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
601: GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
701: ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
801: KKQEDGLWKF CQSDIQIQK
Arabidopsis Description
CDP1Plastid division protein CDP1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VY16]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.