CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87699
EES06197
EES13042
EES13095
OQU89910

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75010.1	OQU89910	AT1G75010.1	17304239
AT1G75010.1	EES13095	AT3G19180.1	19564892
AT1G75010.1	EER87699	AT5G24020.1	17304239
AT1G75010.1	EES06197	AT5G42480.1	19453460
AT1G75010.1	EES13042	AT5G55280.1	17304239

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021407_P001	Maize	plastid	83.05	85.03
Os09t0555600-01	Rice	plastid	68.82	71.89
TraesCS5D01G365000.1	Wheat	plastid	67.53	71.31
TraesCS5A01G356200.1	Wheat	plastid	67.53	71.12
TraesCS5B01G358700.1	Wheat	plastid	67.4	70.98
HORVU5Hr1G088120.2	Barley	plastid	66.36	64.61
CDY37266	Canola	mitochondrion	4.27	48.53
VIT_01s0010g02140.t01	Wine grape	mitochondrion	33.76	37.5
Bra015875.1-P	Field mustard	plastid	34.67	36.27
Solyc01g007880.2.1	Tomato	plastid	35.83	35.47
KRH36043	Soybean	plastid	35.32	35.27
AT1G75010.1	Thale cress	plastid	33.76	35.22
CDX73132	Canola	plastid	34.15	34.38
CDY64472	Canola	endoplasmic reticulum, extracellular	34.15	33.98
GSMUA_Achr2P03680_001	Banana	nucleus	43.47	29.63
CDY46020	Canola	golgi	0.0	0.0

Protein Annotations

MapMan:13.6.1.2.4	Gene3D:2.20.110.10	Gene3D:3.40.50.1440	UniProt:A0A1W0W6A3	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009536	GO:GO:0009570	GO:GO:0009707	GO:GO:0009987
GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0035452	GO:GO:0043621
InterPro:IPR036525	InterPro:MORN	EnsemblPlants:OQU89910	ProteinID:OQU89910	ProteinID:OQU89910.1	PFAM:PF02493
PANTHER:PTHR23084	SMART:SM00698	EnsemblPlantsGene:SORBI_3002G292800	SUPFAM:SSF52490	SUPFAM:SSF82185	InterPro:Tubulin/FtsZ_GTPase_sf
UniParc:UPI0009DC8DC3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:67038441..67046170

Molecular Weight (calculated)

85282.9 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.263

Length

773 amino acids

Sequence
(BLAST)

001: MPLNRGFLPL TVTVSFTARA AYTPASPMAA PVRALPLPSP VAPRMTLRDR SSCSRCRAPG VRAAAAAAAA AAGASRATEP VEVVGVGSRK DAVIDFCLGS
101: RTLSSTPIRF WTVHVMDNSK VQLIQKGHGT DAVFRDLESP LFLHPCPPAV ILVSSAGQDA DHITAMELLS AVKSAGNLAA SIFLKPFCFE GQRRQVEAAD
201: LIGKLQTCSN FHIVIEADSL LETEVETLAE ALESANNAVL STISMISIMM SGYNKMFWSS LNAQIKEIGP EEVAKLLRSY GEARVGFGAG YNIQSAIKQA
301: VFHCPFLLGG IKDLNNVVFL SLTTARVLSE SDMISILHIF RRVTGFMKDI IFSRNSEPDL EPKLIVVSLL TTRNHYDESV STVQEGFLSS LAFHFPFISS
401: FMGGDIPEQK QIRSKHSFNR LPENRTNSVE QDEFSQLSNW SSDAATVPKL FPEEFEDLES VRDSNDRNER IKPESLEDNL AVTGEMSKDD DREHLASQQE
501: HRFLSNSPGF DIAQLWAKQR AMANGSSEND ELDIVTFPVG VKLSKVQSDH SPNTQPETLG ADTTVATGHA AFGVSFSDVP LEKVMDMCSS AVAFLRNRMN
601: RSRKHGSNSI SSRAALMLDA EREPEKTWSP IVEIRYGGGT YRGRCQEGVP EGKGRLTFSD GSFYDGLWRY GKRSGLGTLF HSNGDVYHGT WRDDLIHGKG
701: WYYFHSGDRW FANFWKGKAN GEGRFYAKDG SIFFGHFQNG WRHGESLLVD ANGSRWIEVW ADGVLIDRTK MEK

Best Arabidopsis Sequence Match ( AT1G75010.1 )
(BLAST)

001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D

Arabidopsis Description

ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.