Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0555600-01 | Rice | plastid | 30.42 | 46.62 |
| TraesCS5A01G356200.1 | Wheat | plastid | 29.81 | 46.05 |
| TraesCS5D01G365000.1 | Wheat | plastid | 29.72 | 46.04 |
| TraesCS5B01G358700.1 | Wheat | plastid | 29.37 | 45.37 |
| VIT_01s0010g02140.t01 | Wine grape | mitochondrion | 27.69 | 45.11 |
| CDY37266 | Canola | mitochondrion | 2.65 | 44.12 |
| Zm00001d021407_P001 | Maize | plastid | 29.37 | 44.11 |
| OQU89910 | Sorghum | plastid | 29.63 | 43.47 |
| HORVU5Hr1G088120.2 | Barley | plastid | 29.98 | 42.82 |
| KRH36043 | Soybean | plastid | 27.78 | 40.7 |
| Solyc01g007880.2.1 | Tomato | plastid | 26.1 | 37.9 |
| Bra015875.1-P | Field mustard | plastid | 24.25 | 37.21 |
| AT1G75010.1 | Thale cress | plastid | 23.99 | 36.71 |
| CDX73132 | Canola | plastid | 24.78 | 36.59 |
| CDY64472 | Canola | endoplasmic reticulum, extracellular | 24.25 | 35.39 |
| CDY46020 | Canola | golgi | 0.09 | 5.88 |
Protein Annotations
| MapMan:13.6.1.2.4 | Gene3D:2.20.110.10 | Gene3D:3.40.50.1440 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr2G03680_001 | EnsemblPlants:GSMUA_Achr2P03680_001 | EnsemblPlants:GSMUA_Achr2T03680_001 | InterPro:IPR017877 |
| InterPro:IPR036525 | UniProt:M0S4V9 | InterPro:MORN | InterPro:Myb-like_dom | PFAM:PF02493 | PFAM:PF13837 |
| PRINTS:PR00423 | PFscan:PS50090 | PANTHER:PTHR33492 | PANTHER:PTHR33492:SF2 | SMART:SM00698 | SUPFAM:SSF52490 |
| SUPFAM:SSF82185 | InterPro:Tubulin/FtsZ_GTPase_sf | InterPro:Tubulin_FtsZ_GTPase | UniParc:UPI0002963423 | SEG:seg | : |
Description
MORN repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G03680_001]
Coordinates
chr2:-:9323093..9346088
Molecular Weight (calculated)
124149.0 Da
IEP (calculated)
7.760
GRAVY (calculated)
-0.380
Length
1134 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSEAAEHSSA LALLHHHHQP PPHPHAQPPA SPSAAGGIVR CYRKGNWTLH ETLILITAKR LDDERRAGAS SSLAHCSPSA AAGGGPVAVP RSAEQRWKWV
0101: ENYCWRNGCL RSQNQCNDKW DNLLRDYKKV RGYEARAGGG ELPSYWAMER HERKERNLPT NLAGEVFEAL TDVLSRRAAR RANATPVSSR PPPPPPSPPR
0201: LPQPPANPPP PPPLPPPPPP PPPPAQPSVS GTLGSLMPLS VDQISSLIFL KLPPFSPFTC QRSDSSSSIV AVSLAGAAEP EAKRRRLRRL GSSVVRSATV
0301: LARTLLACEE KREQRHRELV ELEERRLRLE EERTEMRRQG FAGLISAVNN LSGAIHALVA DHRNGDHSPL SSLPMEAVAP GTSLAVFRTS CWRRGSRAGI
0401: PALRDFSGVR CRKRALRLRA AATSSDVGRI DASRGSEPVE VIGIGSRKDA VIDFCLNSPT VSASRLRFWT IQMRDSFKVQ LLQRCHGTGM VQGNVEFLLS
0501: LHQHPPAVIL VASSGHGLDH ITAIELLNVV KSAGGLAVAI LLKPFNFEGQ RRQEEVKKLE IQLKDCSHFH IVVEADSLLK REVETLAEAL ETANNAVFLA
0601: LSTISIMISE THLKFQNSPD GQMKELGPME IEKILQSYGE AKVGFGAGYD IKSSIKQAIV HCPFLGGSIK DFNGPIIFTF ASASGVNESD VRSAIITFRQ
0701: IAESKSEIII STVQEPHLES NLVLTTLLIV GSSQNVVSHK KGLLTSLALH FPFLSSLIGR GFSQPQNDVA VCASKPMVDA SSPSDNGTIS NLDSAKCAID
0801: YLNQCPQEIQ NDVSTGITSS EVESEAKSSE WSHELVHENS NETKNEQPGI QNDHPSIQNI GPGFDIAQLW AKECALHVTN KANEMETFCL PVGIKQTEIF
0901: PDHYNDPRIP DNLDDCDGNK ESLNSQTVAS RGAVMDTGLE AVLGIYNSAV TMIKGGNSND CRNGGLLSAR AASMLEAERE SEKSWTPVIE IQFKGGSYRG
1001: RCQGGLPEGK GRLTFKDGSF YDGMWRNGKR CGLGTLYYSN GDVFQGSWRD DLMHGKGWLY FHSGDRWFAN FWKGKANGEG RFYSKSGSIY FGNFKNGWRH
1101: DQGLCIDIDG LRWTEIWEEG ILVSRTQLDN AITG
0101: ENYCWRNGCL RSQNQCNDKW DNLLRDYKKV RGYEARAGGG ELPSYWAMER HERKERNLPT NLAGEVFEAL TDVLSRRAAR RANATPVSSR PPPPPPSPPR
0201: LPQPPANPPP PPPLPPPPPP PPPPAQPSVS GTLGSLMPLS VDQISSLIFL KLPPFSPFTC QRSDSSSSIV AVSLAGAAEP EAKRRRLRRL GSSVVRSATV
0301: LARTLLACEE KREQRHRELV ELEERRLRLE EERTEMRRQG FAGLISAVNN LSGAIHALVA DHRNGDHSPL SSLPMEAVAP GTSLAVFRTS CWRRGSRAGI
0401: PALRDFSGVR CRKRALRLRA AATSSDVGRI DASRGSEPVE VIGIGSRKDA VIDFCLNSPT VSASRLRFWT IQMRDSFKVQ LLQRCHGTGM VQGNVEFLLS
0501: LHQHPPAVIL VASSGHGLDH ITAIELLNVV KSAGGLAVAI LLKPFNFEGQ RRQEEVKKLE IQLKDCSHFH IVVEADSLLK REVETLAEAL ETANNAVFLA
0601: LSTISIMISE THLKFQNSPD GQMKELGPME IEKILQSYGE AKVGFGAGYD IKSSIKQAIV HCPFLGGSIK DFNGPIIFTF ASASGVNESD VRSAIITFRQ
0701: IAESKSEIII STVQEPHLES NLVLTTLLIV GSSQNVVSHK KGLLTSLALH FPFLSSLIGR GFSQPQNDVA VCASKPMVDA SSPSDNGTIS NLDSAKCAID
0801: YLNQCPQEIQ NDVSTGITSS EVESEAKSSE WSHELVHENS NETKNEQPGI QNDHPSIQNI GPGFDIAQLW AKECALHVTN KANEMETFCL PVGIKQTEIF
0901: PDHYNDPRIP DNLDDCDGNK ESLNSQTVAS RGAVMDTGLE AVLGIYNSAV TMIKGGNSND CRNGGLLSAR AASMLEAERE SEKSWTPVIE IQFKGGSYRG
1001: RCQGGLPEGK GRLTFKDGSF YDGMWRNGKR CGLGTLYYSN GDVFQGSWRD DLMHGKGWLY FHSGDRWFAN FWKGKANGEG RFYSKSGSIY FGNFKNGWRH
1101: DQGLCIDIDG LRWTEIWEEG ILVSRTQLDN AITG
001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
Arabidopsis Description
ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.