Factsheet for GSMUA_Achr9P23510_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P03680_001
GSMUA_Achr3P18770_001
GSMUA_Achr9P23510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24020.1	GSMUA_Achr10P...	AT1G69390.1	16014621
AT5G24020.1	GSMUA_Achr3P18770_001	AT1G69390.1	16014621
AT5G24020.1	GSMUA_Achr10P...	AT1G69390.1	16146521
AT5G24020.1	GSMUA_Achr3P18770_001	AT1G69390.1	16146521
AT5G24020.1	GSMUA_Achr2P03680_001	AT1G75010.1	17304239
AT5G24020.1	GSMUA_Achr9P23510_001	AT5G24020.1	16014621
AT5G24020.1	GSMUA_Achr9P23510_001	AT5G24020.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009723.1-P	Field mustard	cytosol	52.4	87.93
CDY11108	Canola	mitochondrion	19.86	74.36
CDX88064	Canola	plastid	78.08	69.72
VIT_16s0050g01070.t01	Wine grape	plastid	79.45	69.67
AT5G24020.1	Thale cress	plastid	77.74	69.63
CDX80403	Canola	plastid	78.08	69.51
Solyc03g007980.1.1	Tomato	plastid	78.42	69.18
KRH08863	Soybean	plastid	76.71	69.14
PGSC0003DMT400026256	Potato	plastid	78.42	68.98
TraesCS7D01G014700.1	Wheat	plastid	68.49	64.1
TraesCS4A01G474300.1	Wheat	plastid	68.49	63.9
Os06t0106000-01	Rice	plastid	66.78	63.73
TraesCS7A01G017400.2	Wheat	mitochondrion, plastid	67.81	63.67
EER87699	Sorghum	plastid	66.78	62.5
Zm00001d035898_P001	Maize	plastid	66.1	61.27
HORVU7Hr1G001800.1	Barley	plastid	68.15	59.05
KRH38382	Soybean	cytosol	76.03	58.42
KRH48126	Soybean	extracellular	37.33	57.98
KRG89709	Soybean	plastid	15.75	32.17

Protein Annotations

MapMan:13.6.1.2.1	Gene3D:3.40.50.300	InterPro:CobQ/CobB/MinD/ParA_Nub-bd_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0010020
GO:GO:0016043	GO:GO:0016787	GO:GO:0030899	GO:GO:0042802	GO:GO:0042803	EnsemblPlantsGene:GSMUA_Achr9G23510_001
EnsemblPlants:GSMUA_Achr9P23510_001	EnsemblPlants:GSMUA_Achr9T23510_001	UniProt:M0U2V8	InterPro:P-loop_NTPase	PFAM:PF01656	PANTHER:PTHR43384
PANTHER:PTHR43384:SF6	SUPFAM:SSF52540	UniParc:UPI0002960692	SEG:seg	:	:

Description

Putative septum site-determining protein minD [Source:GMGC_GENE;Acc:GSMUA_Achr9G23510_001]

Coordinates

chr9:-:28335294..28336265

Molecular Weight (calculated)

31749.9 Da

IEP (calculated)

8.759

GRAVY (calculated)

0.014

Length

292 amino acids

Sequence
(BLAST)

001: MASPFPHLLP SIPLSPFHPP LFLPSKILSP QHRRRPAVSA ALQWNRKPQL AGETPRVVVV TSGKGGVGKT TTTANNRVNY TAVEVLNGDC RLDQALVRDR
101: RCPSLELLCI SKPRSKLPLG FGAKALTWVV DALRSRPAGP PHFVLIDCPA GIDAGFITAI APANEAVLVT TPDITALRDA DRVTGLLECD GIRDIKMIVN
201: RVRTDLIRGE DMMSVLDVQE MLGLALLGVI PEDSEVIKST NRGYPLVLNK PPTMAGLAFE QAAWRLVEQD TMTAVMVEEE PKKKGFFSFF GG

Best Arabidopsis Sequence Match ( AT5G24020.1 )
(BLAST)

001: MASLRLFSTN HQSLLLPSSL SQKTLISSPR FVNNPSRRSP IRSVLQFNRK PELAGETPRI VVITSGKGGV GKTTTTANVG LSLARYGFSV VAIDADLGLR
101: NLDLLLGLEN RVNYTCVEVI NGDCRLDQAL VRDKRWSNFE LLCISKPRSK LPMGFGGKAL EWLVDALKTR PEGSPDFIII DCPAGIDAGF ITAITPANEA
201: VLVTTPDITA LRDADRVTGL LECDGIRDIK MIVNRVRTDM IKGEDMMSVL DVQEMLGLSL LGVIPEDSEV IRSTNRGFPL VLNKPPTLAG LAFEQAAWRL
301: VEQDSMKAVM VEEEPKKRGF FSFFGG

Arabidopsis Description

MIND1Putative septum site-determining protein minD homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MBA2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.