Factsheet for Os06t0106000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0106000-01
Os09t0555600-01
Os12t0498400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24020.1	Os12t0498400-01	AT1G69390.1	16014621
AT5G24020.1	Os12t0498400-01	AT1G69390.1	16146521
AT5G24020.1	Os09t0555600-01	AT1G75010.1	17304239
AT5G24020.1	Os06t0106000-01	AT5G24020.1	16014621
AT5G24020.1	Os06t0106000-01	AT5G24020.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G017400.2	Wheat	mitochondrion, plastid	92.48	91.0
Zm00001d035898_P001	Maize	plastid	93.46	90.79
EER87699	Sorghum	plastid	92.48	90.71
TraesCS4A01G474300.1	Wheat	plastid	92.48	90.42
TraesCS7D01G014700.1	Wheat	plastid	92.16	90.38
HORVU7Hr1G001800.1	Barley	plastid	88.24	80.12
Bra009723.1-P	Field mustard	cytosol	42.16	74.14
GSMUA_Achr9P23510_001	Banana	plastid	63.73	66.78
KRH08863	Soybean	plastid	68.63	64.81
AT5G24020.1	Thale cress	plastid	68.95	64.72
CDX80403	Canola	plastid	67.97	63.41
VIT_16s0050g01070.t01	Wine grape	plastid	68.95	63.36
CDX88064	Canola	plastid	67.65	63.3
CDY11108	Canola	mitochondrion	16.01	62.82
Solyc03g007980.1.1	Tomato	plastid	66.67	61.63
PGSC0003DMT400026256	Potato	plastid	66.67	61.45
KRH48126	Soybean	extracellular	36.27	59.04
KRH38382	Soybean	cytosol	67.97	54.74
KRG89709	Soybean	plastid	16.01	34.27

Protein Annotations

MapMan:13.6.1.2.1	Gene3D:3.40.50.300	EntrezGene:4339865	EMBL:AK059897	EMBL:AK105653	ProteinID:BAA90628.1
ProteinID:BAF18475.1	ProteinID:BAS95748.1	InterPro:CobQ/CobB/MinD/ParA_Nub-bd_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941
GO:GO:0009987	GO:GO:0010020	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0030899
GO:GO:0042802	GO:GO:0042803	InterPro:MinD	InterPro:MinD_bac-type	EnsemblPlantsGene:Os06g0106000	EnsemblPlants:Os06t0106000-01
InterPro:P-loop_NTPase	PFAM:PF01656	PIRSF:PIRSF003092	PANTHER:PTHR43384	PANTHER:PTHR43384:SF6	UniProt:Q9LWY6
SUPFAM:SSF52540	TIGRFAMs:TIGR01968	UniParc:UPI00000A100D	RefSeq:XP_015642930.1	SEG:seg	:

Description

Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-01);Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-02)

Coordinates

chr6:+:410926..412986

Molecular Weight (calculated)

32343.5 Da

IEP (calculated)

6.917

GRAVY (calculated)

0.146

Length

306 amino acids

Sequence
(BLAST)

001: MAFAPRLLLP SRCPPPASSP ARHGGRTAPE LSGPTPRVVV VTSGKGGVGK TTTTANLAAS LARLSLSAVA VDADAGLRNL DLLLGLENRV HLTAADVLAG
101: DCRLDQALVR HRALHDLQLL CLSKPRSKLP LAFGSKTLTW VADALRRAAN PPAFILIDCP AGVDAGFVTA IAPAEEAVLV TTPDITALRD ADRVAGLLEC
201: DGIKDIKIIV NRVRPDLVKG EDMMSALDVQ EMLGLPLLGV VPEDAEVIRS TNRGVPLVLN DPPTPAGLAL EQATWRLVER DAMTAVMVEE QERPKKKAGF
301: FSFFGG

Best Arabidopsis Sequence Match ( AT5G24020.1 )
(BLAST)

001: MASLRLFSTN HQSLLLPSSL SQKTLISSPR FVNNPSRRSP IRSVLQFNRK PELAGETPRI VVITSGKGGV GKTTTTANVG LSLARYGFSV VAIDADLGLR
101: NLDLLLGLEN RVNYTCVEVI NGDCRLDQAL VRDKRWSNFE LLCISKPRSK LPMGFGGKAL EWLVDALKTR PEGSPDFIII DCPAGIDAGF ITAITPANEA
201: VLVTTPDITA LRDADRVTGL LECDGIRDIK MIVNRVRTDM IKGEDMMSVL DVQEMLGLSL LGVIPEDSEV IRSTNRGFPL VLNKPPTLAG LAFEQAAWRL
301: VEQDSMKAVM VEEEPKKRGF FSFFGG

Arabidopsis Description

MIND1Putative septum site-determining protein minD homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MBA2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.