Factsheet for Os12t0498400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0106000-01
Os09t0555600-01
Os12t0498400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69390.1	Os12t0498400-01	AT1G69390.1	16146521
AT1G69390.1	Os09t0555600-01	AT1G75010.1	17304239
AT1G69390.1	Os06t0106000-01	AT5G24020.1	16014621
AT1G69390.1	Os06t0106000-01	AT5G24020.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17047	Sorghum	plastid	77.12	79.82
Zm00001d023760_P001	Maize	plastid	75.42	78.07
TraesCS5B01G114800.1	Wheat	plastid	77.12	77.45
TraesCS5D01G117000.1	Wheat	plastid	77.12	77.12
TraesCS5A01G107500.1	Wheat	plastid	77.12	77.12
HORVU5Hr1G035440.4	Barley	plastid	75.85	72.76
GSMUA_Achr3P18770_001	Banana	plastid	50.85	52.4
Bra038308.1-P	Field mustard	cytosol	43.22	52.04
GSMUA_Achr10P...	Banana	plastid	50.42	51.97
CDY28547	Canola	plastid	47.46	50.45
KRH70831	Soybean	plastid	49.58	50.43
CDY44064	Canola	plastid	46.61	49.77
CDX95938	Canola	plastid	46.61	49.77
Bra004378.1-P	Field mustard	plastid	46.61	49.77
KRH74964	Soybean	plastid	48.73	49.57
CDY40918	Canola	plastid	47.03	49.55
VIT_14s0108g01300.t01	Wine grape	plastid	48.31	48.93
PGSC0003DMT400072828	Potato	plastid	47.46	47.86
Solyc05g012710.2.1	Tomato	plastid	47.46	47.86
AT1G69390.1	Thale cress	plastid	45.76	47.16
CDY51505	Canola	cytosol	19.92	47.0

Protein Annotations

MapMan:13.6.1.2.3	Gene3D:3.30.1070.10	EntrezGene:4352263	ProteinID:ABA98600.2	EMBL:AK058897	EMBL:AK070044
EMBL:AY496951	ProteinID:BAF29830.1	ProteinID:BAT17234.1	ProteinID:EEE53253.1	GO:GO:0007049	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0032955	GO:GO:0051301	InterPro:IPR036707	InterPro:MinE
InterPro:MinE_sf	EnsemblPlantsGene:Os12g0498400	EnsemblPlants:Os12t0498400-01	PFAM:PF03776	PANTHER:PTHR33404	PANTHER:PTHR33404:SF8
UniProt:Q5J6J5	UniParc:UPI000049EFCA	RefSeq:XP_015618636.1	:	:	:

Description

Septum formation topological specificity factor MinE family protein. (Os12t0498400-01);Septum formation topological specificity factor MinE family protein. (Os12t0498400-02)

Coordinates

chr12:-:18913320..18915680

Molecular Weight (calculated)

25983.9 Da

IEP (calculated)

7.440

GRAVY (calculated)

-0.258

Length

236 amino acids

Sequence
(BLAST)

001: MAMATSISAG FGGEPGAVLA PSASVLPAPR RRNPATSSKA QFSSFPRGRS CNIMLTPKHL GIEHQSCSKS SIQTFALSRN DFSPIAQEVE GFLHNIVNMG
101: FLDRLKLAWK IIFPAPSIKE NSNANIAKQR LKMILFSDRC EVSDEAKKKI VENIVEALSE FVEIESRDNV QVDISTDAGL GTVYSVTVPV RRVKPEYQES
201: EEQYRGKIVG VDFKDTGETS GSVDVTFDFF VPNKNY

Best Arabidopsis Sequence Match ( AT1G69390.1 )
(BLAST)

001: MAMSSGTLRI SATLVSPYHH HHRNRLSLPS SSSKVDFTGF ISNGVNSLET QKCTPGLAIS RENTRGQVKV LARNTGDYEL SPSPAEQEIE SFLYNAINMG
101: FFDRLNLAWK IIFPSHASRR SSNARIAKQR LKMILFSDRC DVSDEAKRKI VNNIIHALSD FVEIESEEKV QLNVSTDGDL GTIYSVTVPV RRVKPEYQDV
201: DEAGTITNVE YKDTRDGSVD VRFDFYVPE

Arabidopsis Description

MINE1Cell division topological specificity factor homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C4Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.