Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0122400-01 | |
| Os04t0665400-01 | |
| Os04t0675700-00 | |
| Os06t0106000-01 | |
| Os09t0555600-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G365000.1 | Wheat | plastid | 71.22 | 71.99 |
| TraesCS5A01G356200.1 | Wheat | plastid | 71.22 | 71.8 |
| TraesCS5B01G358700.1 | Wheat | plastid | 70.41 | 70.98 |
| Zm00001d021407_P001 | Maize | plastid | 70.81 | 69.4 |
| OQU89910 | Sorghum | plastid | 71.89 | 68.82 |
| HORVU5Hr1G088120.2 | Barley | plastid | 70.14 | 65.37 |
| CDY37266 | Canola | mitochondrion | 4.46 | 48.53 |
| VIT_01s0010g02140.t01 | Wine grape | mitochondrion | 37.84 | 40.23 |
| Bra015875.1-P | Field mustard | plastid | 36.22 | 36.27 |
| KRH36043 | Soybean | plastid | 36.89 | 35.27 |
| AT1G75010.1 | Thale cress | plastid | 35.14 | 35.09 |
| Solyc01g007880.2.1 | Tomato | plastid | 36.62 | 34.7 |
| CDX73132 | Canola | plastid | 35.68 | 34.38 |
| CDY64472 | Canola | endoplasmic reticulum, extracellular | 35.41 | 33.72 |
| GSMUA_Achr2P03680_001 | Banana | nucleus | 46.62 | 30.42 |
| CDY46020 | Canola | golgi | 0.14 | 5.88 |
Protein Annotations
| MapMan:13.6.1.2.4 | Gene3D:2.20.110.10 | Gene3D:3.40.50.1440 | EntrezGene:4347814 | ProteinID:BAF25807.1 | ProteinID:BAT09349.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009707 |
| GO:GO:0009987 | GO:GO:0010020 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0035452 | GO:GO:0043621 |
| InterPro:IPR036525 | InterPro:MORN | EnsemblPlantsGene:Os09g0555600 | EnsemblPlants:Os09t0555600-01 | PFAM:PF02493 | PANTHER:PTHR23084 |
| PANTHER:PTHR23084:SF204 | UniProt:Q0IZQ8 | SMART:SM00698 | SUPFAM:SSF52490 | SUPFAM:SSF82185 | InterPro:Tubulin/FtsZ_GTPase_sf |
| UniParc:UPI0000DD987F | RefSeq:XP_015611696.1 | SEG:seg | : | : | : |
Description
accumulation and replication of chloroplast, ARC3 homologueMORN motif repeat containing protein. (Os09t0555600-01)
Coordinates
chr9:-:22048464..22057029
Molecular Weight (calculated)
81225.2 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.250
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLRGLAL SPPPLVAPPT CAPSRRLVPS PRSRSGYGVR VAAAADGAPR PSDPVEVVGV GSRKDAVIDF CLGSRTLSST PIRFWTMHVV DNCTVQLIQK
101: SHGEDVVVRD LETPLSLQPC PPAVILVASA GQDADHITAM ELLSEVKSAG KLAASIFLKP FCFEGQRRQL EATDLIDKLQ MCSNFHIVIE ADSLLETEVE
201: TLAEALESAN NAVLSTISMI SIMMSGLNQT FRSSINAQIM EVHPDELGQL LRSYGEARIG FGAGYNIQSA IKQAVFHCPF LRGGIKDLNN VVFLSITSSR
301: IFSESDMVST LHIFRRVTGF TEDIIFSRNC EPDLEPKLIV VSLLTVRNST DENVASVKEG FLSGLALHFP FISSLMGGDI PEQKQATLKH SYSKLPSNGL
401: SLAEQEFSRL SSAFTNVVVN NLFPEETDIM KSERESKEKT QTQSQEAKIE PDGEISKDRE REHLDSEQEH KFWSNSPGIG IAQLWAKVRM ASDGGTQNND
501: INIITLPVGV KSPEVQCGAD TRPEAHSGSS STSAASGHAA FGVSFSDIGL EKVTEMYSSA MTFLKGGMDR SRKRGSVANR AALMLDAERE LEKTWSPIVE
601: IQFGGGIYRG RCQEGVPEGK GRITFSDGSF YDGLWRYGKR SGLGTLYYSN GDVFHGTWRD DLFHGKGWYY FHSGDRWFAN FWKGRANGEG RFYAKDGSVF
701: FGNFQNGWRH GEALLIDANG SRWIEVWDDG VLIGQTRLEK
101: SHGEDVVVRD LETPLSLQPC PPAVILVASA GQDADHITAM ELLSEVKSAG KLAASIFLKP FCFEGQRRQL EATDLIDKLQ MCSNFHIVIE ADSLLETEVE
201: TLAEALESAN NAVLSTISMI SIMMSGLNQT FRSSINAQIM EVHPDELGQL LRSYGEARIG FGAGYNIQSA IKQAVFHCPF LRGGIKDLNN VVFLSITSSR
301: IFSESDMVST LHIFRRVTGF TEDIIFSRNC EPDLEPKLIV VSLLTVRNST DENVASVKEG FLSGLALHFP FISSLMGGDI PEQKQATLKH SYSKLPSNGL
401: SLAEQEFSRL SSAFTNVVVN NLFPEETDIM KSERESKEKT QTQSQEAKIE PDGEISKDRE REHLDSEQEH KFWSNSPGIG IAQLWAKVRM ASDGGTQNND
501: INIITLPVGV KSPEVQCGAD TRPEAHSGSS STSAASGHAA FGVSFSDIGL EKVTEMYSSA MTFLKGGMDR SRKRGSVANR AALMLDAERE LEKTWSPIVE
601: IQFGGGIYRG RCQEGVPEGK GRITFSDGSF YDGLWRYGKR SGLGTLYYSN GDVFHGTWRD DLFHGKGWYY FHSGDRWFAN FWKGRANGEG RFYAKDGSVF
701: FGNFQNGWRH GEALLIDANG SRWIEVWDDG VLIGQTRLEK
001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
Arabidopsis Description
ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.