Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G365000.1 | Wheat | plastid | 5.88 | 0.14 |
| TraesCS5A01G356200.1 | Wheat | plastid | 5.88 | 0.14 |
| TraesCS5B01G358700.1 | Wheat | plastid | 5.88 | 0.14 |
| Os09t0555600-01 | Rice | plastid | 5.88 | 0.14 |
| HORVU5Hr1G088120.2 | Barley | plastid | 5.88 | 0.13 |
| GSMUA_Achr2P03680_001 | Banana | nucleus | 5.88 | 0.09 |
| CDX73132 | Canola | plastid | 0.0 | 0.0 |
| CDY37266 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY64472 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| OQU89910 | Sorghum | plastid | 0.0 | 0.0 |
| Zm00001d021407_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY46020 | EnsemblPlantsGene:GSBRNA2T00083136001 | ProteinID:CDY46020 | ProteinID:CDY46020.1 | UniParc:UPI0004EDC6DC | UniProt:A0A078I5C0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g17060DBnaA02g17060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5C0]
Coordinates
chrLK032646:+:33155..33387
Molecular Weight (calculated)
2107.7 Da
IEP (calculated)
12.981
GRAVY (calculated)
-0.706
Length
17 amino acids
Sequence
(BLAST)
(BLAST)
1: MARRFNTRKG VVLFQQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.