Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G356200.1 | Wheat | plastid | 83.38 | 90.19 |
| TraesCS5D01G365000.1 | Wheat | plastid | 82.62 | 89.62 |
| TraesCS5B01G358700.1 | Wheat | plastid | 82.62 | 89.37 |
| Os09t0555600-01 | Rice | plastid | 65.37 | 70.14 |
| Zm00001d021407_P001 | Maize | plastid | 64.23 | 67.55 |
| OQU89910 | Sorghum | plastid | 64.61 | 66.36 |
| CDY37266 | Canola | mitochondrion | 4.03 | 47.06 |
| VIT_01s0010g02140.t01 | Wine grape | mitochondrion | 34.13 | 38.94 |
| KRH36043 | Soybean | plastid | 34.76 | 35.66 |
| Bra015875.1-P | Field mustard | plastid | 32.87 | 35.32 |
| AT1G75010.1 | Thale cress | plastid | 32.75 | 35.09 |
| Solyc01g007880.2.1 | Tomato | plastid | 33.12 | 33.67 |
| CDX73132 | Canola | plastid | 32.24 | 33.33 |
| CDY64472 | Canola | endoplasmic reticulum, extracellular | 32.12 | 32.82 |
| GSMUA_Achr2P03680_001 | Banana | nucleus | 42.82 | 29.98 |
| CDY46020 | Canola | golgi | 0.13 | 5.88 |
Protein Annotations
| MapMan:13.6.1.2.4 | Gene3D:2.20.110.10 | Gene3D:3.40.50.1440 | UniProt:A0A287S682 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009707 | GO:GO:0009987 | GO:GO:0010020 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0035452 | GO:GO:0043621 | EnsemblPlantsGene:HORVU5Hr1G088120 | EnsemblPlants:HORVU5Hr1G088120.2 | InterPro:IPR036525 |
| InterPro:MORN | PFAM:PF02493 | PANTHER:PTHR23084 | SMART:SM00698 | SUPFAM:SSF52490 | SUPFAM:SSF82185 |
| InterPro:Tubulin/FtsZ_GTPase_sf | UniParc:UPI000B46CB7A | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:580809201..580828497
Molecular Weight (calculated)
87429.0 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.353
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: GINNKHVGPV SQAQPQSTND QQFPFSLASP LTGGSHQSPH AVAAYGLKTH RRPLLASSSS MAASVRGGLV VPLRPPLASP RCLAPSPRRR RRRLPRVRAA
101: AAEPVEVVGV GSRKDAVIDF CLGSRTLSST PIRFWTVRVD NSEVQFIPRS QDTGPAVGDM EHPLSLHPCP SAVIIVASAG QEADQLAALE LLSTTKSANN
201: LAASIFLKPF CFEGQRRQLE ASDLIVKLQA CSNFHIVIEA DSLLETEVET LAEALESANN AVLSTISMIS IMMSGFNQMF WSSLDEQIKE VGPEEVGKPL
301: KSYGEARVGF GAGYNVQSAI KQAVLHCPFL RGGIKDLNHV VFLSLTTSRV LAESDMISTL HIFRRVTEFT KDIIFSRNSE PDLEPKLIVV SLLTIRNSRD
401: ENVASVNEGF LSNLALHFPF ITSLMGRDTQ ELKQAWSNHS FRQPPGSAFS VEDQGLPKLF SVSTDATVSN LCSDEIETIK TERESNNNNG KIQPEFEEAT
501: FESDGDTSID VGRENLSSQQ ERNFWSNTPA FAIAQLWAKE RTTTGRHNQR NELDYITLPV GVKSLEVQYD HSPNTQPETR MATDSTFLSS GHAASAASLS
601: GVGLEKVIEI YSSAAAFLKG KMNKSRKRGS AASRAASMLD AERELEKTWS PIVEIQFGEG TYRGRCQEGV PEGKGRLTYS DGSIYDGLWR YGKRSGLGTL
701: YYSNGDVFHG TWRDDLIHGK GWYYFHSGDR WFANFWKGKA SGEGRFYAKD GSILFGHFQN GWRHGECLLI DGHGSRWLEV WDDGVLTGRT KLEE
101: AAEPVEVVGV GSRKDAVIDF CLGSRTLSST PIRFWTVRVD NSEVQFIPRS QDTGPAVGDM EHPLSLHPCP SAVIIVASAG QEADQLAALE LLSTTKSANN
201: LAASIFLKPF CFEGQRRQLE ASDLIVKLQA CSNFHIVIEA DSLLETEVET LAEALESANN AVLSTISMIS IMMSGFNQMF WSSLDEQIKE VGPEEVGKPL
301: KSYGEARVGF GAGYNVQSAI KQAVLHCPFL RGGIKDLNHV VFLSLTTSRV LAESDMISTL HIFRRVTEFT KDIIFSRNSE PDLEPKLIVV SLLTIRNSRD
401: ENVASVNEGF LSNLALHFPF ITSLMGRDTQ ELKQAWSNHS FRQPPGSAFS VEDQGLPKLF SVSTDATVSN LCSDEIETIK TERESNNNNG KIQPEFEEAT
501: FESDGDTSID VGRENLSSQQ ERNFWSNTPA FAIAQLWAKE RTTTGRHNQR NELDYITLPV GVKSLEVQYD HSPNTQPETR MATDSTFLSS GHAASAASLS
601: GVGLEKVIEI YSSAAAFLKG KMNKSRKRGS AASRAASMLD AERELEKTWS PIVEIQFGEG TYRGRCQEGV PEGKGRLTYS DGSIYDGLWR YGKRSGLGTL
701: YYSNGDVFHG TWRDDLIHGK GWYYFHSGDR WFANFWKGKA SGEGRFYAKD GSILFGHFQN GWRHGECLLI DGHGSRWLEV WDDGVLTGRT KLEE
001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D
Arabidopsis Description
ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.