Factsheet for HORVU7Hr1G001800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G035440.4
HORVU5Hr1G088120.2
HORVU7Hr1G001800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24020.1	HORVU5Hr1G035440.4	AT1G69390.1	16014621
AT5G24020.1	HORVU5Hr1G035440.4	AT1G69390.1	16146521
AT5G24020.1	HORVU5Hr1G088120.2	AT1G75010.1	17304239
AT5G24020.1	HORVU7Hr1G001800.1	AT5G24020.1	16014621
AT5G24020.1	HORVU7Hr1G001800.1	AT5G24020.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G014700.1	Wheat	plastid	84.57	91.35
TraesCS4A01G474300.1	Wheat	plastid	84.27	90.73
TraesCS7A01G017400.2	Wheat	mitochondrion, plastid	83.68	90.68
Os06t0106000-01	Rice	plastid	80.12	88.24
EER87699	Sorghum	plastid	81.31	87.82
Zm00001d035898_P001	Maize	plastid	81.6	87.3
Bra009723.1-P	Field mustard	cytosol	38.87	75.29
GSMUA_Achr9P23510_001	Banana	plastid	59.05	68.15
KRH08863	Soybean	plastid	62.61	65.12
CDX80403	Canola	plastid	63.2	64.94
AT5G24020.1	Thale cress	plastid	62.61	64.72
VIT_16s0050g01070.t01	Wine grape	plastid	63.5	64.26
CDX88064	Canola	plastid	62.31	64.22
Solyc03g007980.1.1	Tomato	plastid	62.31	63.44
PGSC0003DMT400026256	Potato	plastid	61.72	62.65
CDY11108	Canola	mitochondrion	14.24	61.54
KRH48126	Soybean	extracellular	33.23	59.57
KRH38382	Soybean	cytosol	62.61	55.53
KRG89709	Soybean	plastid	15.13	35.66

Protein Annotations

MapMan:13.6.1.2.1	Gene3D:3.40.50.300	UniProt:A0A287VD33	InterPro:CobQ/CobB/MinD/ParA_Nub-bd_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987
GO:GO:0010020	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0030899	GO:GO:0042802
GO:GO:0042803	EnsemblPlantsGene:HORVU7Hr1G001800	EnsemblPlants:HORVU7Hr1G001800.1	InterPro:MinD_bac-type	InterPro:P-loop_NTPase	PFAM:PF01656
PANTHER:PTHR43384	PANTHER:PTHR43384:SF6	SUPFAM:SSF52540	TIGRFAMs:TIGR01968	UniParc:UPI000B463BBF	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:3761057..3763173

Molecular Weight (calculated)

35782.6 Da

IEP (calculated)

7.963

GRAVY (calculated)

0.058

Length

337 amino acids

Sequence
(BLAST)

001: FLFQPWSQPP PREILPTETL AAARTPMAAF APRLLLPPRP PGPTPARASA RHNGGGRTAP ELSGPTPRVV VVTSGKGGVG KTTTTANLAA SLARLGLPVV
101: AVDADAGLRN LDLLLGLENR VNLTAADVLA GDCRLDQALI RHRSLRGLHL LCLSKPRSKL PLAFGSKTLT WVADALRRSP DPPAFILIDC PAGVDAGFVT
201: AIAPAEEAVL VTTPDITALR DADRVAGLLE CDGIKDIKII VNRVRPDLVR GEDMMSALDV QEMLGLPLLG VVPEDSEVIR STNRGVPLVL TDPPTPAGLA
301: LEQATWRLVE RDAMTAVMVE EQERPKKKGG FFSFFGG

Best Arabidopsis Sequence Match ( AT5G24020.1 )
(BLAST)

001: MASLRLFSTN HQSLLLPSSL SQKTLISSPR FVNNPSRRSP IRSVLQFNRK PELAGETPRI VVITSGKGGV GKTTTTANVG LSLARYGFSV VAIDADLGLR
101: NLDLLLGLEN RVNYTCVEVI NGDCRLDQAL VRDKRWSNFE LLCISKPRSK LPMGFGGKAL EWLVDALKTR PEGSPDFIII DCPAGIDAGF ITAITPANEA
201: VLVTTPDITA LRDADRVTGL LECDGIRDIK MIVNRVRTDM IKGEDMMSVL DVQEMLGLSL LGVIPEDSEV IRSTNRGFPL VLNKPPTLAG LAFEQAAWRL
301: VEQDSMKAVM VEEEPKKRGF FSFFGG

Arabidopsis Description

MIND1Putative septum site-determining protein minD homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MBA2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.