Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009723.1-P | Field mustard | cytosol | 52.76 | 98.85 |
| CDX88064 | Canola | plastid | 94.17 | 93.88 |
| CDX80403 | Canola | plastid | 93.56 | 92.99 |
| VIT_16s0050g01070.t01 | Wine grape | plastid | 83.13 | 81.38 |
| Solyc03g007980.1.1 | Tomato | plastid | 82.21 | 80.97 |
| KRH08863 | Soybean | plastid | 80.37 | 80.86 |
| PGSC0003DMT400026256 | Potato | plastid | 82.21 | 80.72 |
| GSMUA_Achr9P23510_001 | Banana | plastid | 69.63 | 77.74 |
| CDY11108 | Canola | mitochondrion | 18.4 | 76.92 |
| KRH48126 | Soybean | extracellular | 43.56 | 75.53 |
| Os06t0106000-01 | Rice | plastid | 64.72 | 68.95 |
| TraesCS4A01G474300.1 | Wheat | plastid | 65.34 | 68.05 |
| KRH38382 | Soybean | cytosol | 78.83 | 67.63 |
| TraesCS7D01G014700.1 | Wheat | plastid | 64.72 | 67.63 |
| TraesCS7A01G017400.2 | Wheat | mitochondrion, plastid | 64.42 | 67.52 |
| EER87699 | Sorghum | plastid | 63.8 | 66.67 |
| Zm00001d035898_P001 | Maize | plastid | 64.11 | 66.35 |
| HORVU7Hr1G001800.1 | Barley | plastid | 64.72 | 62.61 |
| KRG89709 | Soybean | plastid | 20.55 | 46.85 |
Protein Annotations
| MapMan:13.6.1.2.1 | Gene3D:3.40.50.300 | EntrezGene:832467 | UniProt:A0A178UDI3 | EMBL:AB030278 | ProteinID:AED93246.1 |
| ArrayExpress:AT5G24020 | EnsemblPlantsGene:AT5G24020 | RefSeq:AT5G24020 | TAIR:AT5G24020 | RefSeq:AT5G24020-TAIR-G | EnsemblPlants:AT5G24020.1 |
| TAIR:AT5G24020.1 | Unigene:At.5430 | ProteinID:BAB08725.1 | EMBL:BT002027 | EMBL:BT008819 | InterPro:CobQ/CobB/MinD/ParA_Nub-bd_dom |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 |
| GO:GO:0009528 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009706 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010020 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0030899 |
| GO:GO:0042802 | GO:GO:0042803 | Symbol:MIND | InterPro:MinD_bac-type | RefSeq:NP_197790.1 | ProteinID:OAO91936.1 |
| InterPro:P-loop_NTPase | PFAM:PF01656 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43384 | PANTHER:PTHR43384:SF6 | UniProt:Q9MBA2 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR01968 | UniParc:UPI000004633E | SEG:seg | : | : | : |
Description
MIND1Putative septum site-determining protein minD homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MBA2]
Coordinates
chr5:+:8116665..8118087
Molecular Weight (calculated)
35692.5 Da
IEP (calculated)
7.829
GRAVY (calculated)
0.014
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLRLFSTN HQSLLLPSSL SQKTLISSPR FVNNPSRRSP IRSVLQFNRK PELAGETPRI VVITSGKGGV GKTTTTANVG LSLARYGFSV VAIDADLGLR
101: NLDLLLGLEN RVNYTCVEVI NGDCRLDQAL VRDKRWSNFE LLCISKPRSK LPMGFGGKAL EWLVDALKTR PEGSPDFIII DCPAGIDAGF ITAITPANEA
201: VLVTTPDITA LRDADRVTGL LECDGIRDIK MIVNRVRTDM IKGEDMMSVL DVQEMLGLSL LGVIPEDSEV IRSTNRGFPL VLNKPPTLAG LAFEQAAWRL
301: VEQDSMKAVM VEEEPKKRGF FSFFGG
101: NLDLLLGLEN RVNYTCVEVI NGDCRLDQAL VRDKRWSNFE LLCISKPRSK LPMGFGGKAL EWLVDALKTR PEGSPDFIII DCPAGIDAGF ITAITPANEA
201: VLVTTPDITA LRDADRVTGL LECDGIRDIK MIVNRVRTDM IKGEDMMSVL DVQEMLGLSL LGVIPEDSEV IRSTNRGFPL VLNKPPTLAG LAFEQAAWRL
301: VEQDSMKAVM VEEEPKKRGF FSFFGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.