Factsheet for HORVU0Hr1G018830.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018830.1
HORVU2Hr1G109020.1
HORVU5Hr1G088120.2
HORVU6Hr1G012020.11

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	HORVU5Hr1G088120.2	AT1G75010.1	17304239
AT5G55280.1	HORVU6Hr1G012020.11	AT5G42480.1	16146521
AT5G55280.1	HORVU6Hr1G012020.11	AT5G42480.1	19453460
AT5G55280.1	HORVU0Hr1G018830.1	AT5G55280.1	16146521
AT5G55280.1	HORVU2Hr1G109020.1	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G109020.1	Barley	cytosol	57.92	97.71
TraesCS2B01G516000.1	Wheat	plastid	85.75	94.04
TraesCS2A01G488400.1	Wheat	plastid	85.29	93.55
TraesCS2D01G488700.1	Wheat	plastid	84.62	92.8
EES13042	Sorghum	plastid	78.96	86.17
Os04t0665400-01	Rice	plastid	77.38	85.07
Zm00001d001939_P003	Maize	plastid	77.38	84.44
VIT_19s0090g01320.t01	Wine grape	cytosol	67.65	82.83
Bra035565.1-P	Field mustard	cytosol	65.61	79.89
GSMUA_Achr7P06230_001	Banana	plastid	69.68	74.4
PGSC0003DMT400057147	Potato	plastid	69.68	73.51
CDY19897	Canola	plastid	68.33	73.48
Solyc07g065050.2.1	Tomato	plastid	69.46	73.27
Bra002918.1-P	Field mustard	plastid	68.1	73.24
CDY17316	Canola	plastid	68.1	73.24
CDY06595	Canola	plastid	68.78	71.53
KRG98668	Soybean	plastid	66.74	70.74
CDY20776	Canola	plastid	67.87	70.59
KRH46262	Soybean	plastid	65.84	69.78
KRH73828	Soybean	plastid	65.61	69.38
KRH14302	Soybean	plastid	65.61	69.38
AT5G55280.1	Thale cress	plastid	67.87	69.28
Solyc12g014560.1.1	Tomato	plastid	62.9	59.53
PGSC0003DMT400033429	Potato	plastid	57.24	57.89
HORVU2Hr1G072850.2	Barley	plastid	44.12	42.03
HORVU1Hr1G073840.4	Barley	plastid	43.44	35.62

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	UniProt:A0A287E555	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874
GO:GO:0007017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:HORVU0Hr1G018830	EnsemblPlants:HORVU0Hr1G018830.1
InterPro:IPR036525	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227
ScanProsite:PS01134	ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865
SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_GTPase_sf
InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000B47DC94	SEG:seg	:	:

Description

No Description!

Coordinates

chrchrUn:+:102012653..102015889

Molecular Weight (calculated)

46355.2 Da

IEP (calculated)

7.703

GRAVY (calculated)

-0.109

Length

442 amino acids

Sequence
(BLAST)

001: TANPSKISQN PRSRWTPDPL SSPPRHLPQS PFSPHGQGKM APSTSSASAL IHLPGLPPRR PHSGGCRNQT RRPRHAAVQC SFAFAPVETA RIKVVGVGGG
101: GNNAVNRMIG SGLQGIEFYA INTDSQALVN SQAQHPLQIG EQLTRGLGTG GNPNLGEQAA EESKEVIANA LRDSDLVFIT AGMGGGTGSG AAPVVAQIAK
201: EAGYLTVGVV TYPFSFEGRK RSLQALEALE KLERSVDTLI VIPNDRLLDI ADENMPLQDA FLLADDVLRQ GVQGISDIIT IPGLVNVDFA DVKAVMKNSG
301: TAMLGVGVSS SKNRAQEAAE QATLAPLIGS SIEAATGVVY NITGGKDITL QEVNKVSQIV TSLADPSANI IFGAVVDDRY NGEIHVTIIA TGFPQSFQKS
401: LLADPKGARI LEAKEKAASL VSAAVQQPTP AAVPTWSRRL FS

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.