CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98668
KRH05905
KRH14302
KRH17386
KRH36043
KRH46262
KRH73828

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	KRH36043	AT1G75010.1	17304239
AT5G55280.1	KRH05905	AT5G42480.1	16146521
AT5G55280.1	KRH17386	AT5G42480.1	16146521
AT5G55280.1	KRH05905	AT5G42480.1	19453460
AT5G55280.1	KRH17386	AT5G42480.1	19453460
AT5G55280.1	KRG98668	AT5G55280.1	16146521
AT5G55280.1	KRH14302	AT5G55280.1	16146521
AT5G55280.1	KRH46262	AT5G55280.1	16146521
AT5G55280.1	KRH73828	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g01320.t01	Wine grape	cytosol	76.5	88.37
KRG98668	Soybean	plastid	83.45	83.45
Bra035565.1-P	Field mustard	cytosol	72.42	83.2
HORVU2Hr1G109020.1	Barley	cytosol	49.64	79.01
Bra002918.1-P	Field mustard	plastid	76.5	77.62
CDY17316	Canola	plastid	76.5	77.62
KRH14302	Soybean	plastid	77.46	77.27
KRH73828	Soybean	plastid	77.46	77.27
CDY19897	Canola	plastid	75.54	76.64
PGSC0003DMT400057147	Potato	plastid	75.78	75.42
Solyc07g065050.2.1	Tomato	plastid	75.54	75.18
CDY06595	Canola	plastid	75.06	73.65
AT5G55280.1	Thale cress	plastid	76.26	73.44
CDY20776	Canola	plastid	74.1	72.71
GSMUA_Achr7P06230_001	Banana	plastid	72.18	72.71
TraesCS2D01G488700.1	Wheat	plastid	70.02	72.46
TraesCS2B01G516000.1	Wheat	plastid	70.02	72.46
Os04t0665400-01	Rice	plastid	69.78	72.39
TraesCS2A01G488400.1	Wheat	plastid	69.78	72.21
EES13042	Sorghum	plastid	68.59	70.62
Zm00001d001939_P003	Maize	plastid	68.35	70.37
HORVU0Hr1G018830.1	Barley	cytosol, plastid	69.78	65.84
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.82	42.8
KRH32740	Soybean	plastid	47.48	40.91
KRH20058	Soybean	plastid	47.48	40.74
KRH67910	Soybean	plastid	46.28	40.63
KRG96197	Soybean	plastid	46.28	40.38

Protein Annotations

EntrezGene:100809043	MapMan:13.6.1.1.1	Gene3D:3.40.50.1440	EMBL:ACUP02005332	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS
InterPro:FtsZ_C	EnsemblPlantsGene:GLYMA_08G322800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0010020	GO:GO:0016043	GO:GO:0016787	InterPro:IPR036525	UniProt:K7LA88
EnsemblPlants:KRH46262	ProteinID:KRH46262	ProteinID:KRH46262.1	HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327
PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12
SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C
InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000296C494	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:44142881..44146214

Molecular Weight (calculated)

43901.6 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.002

Length

417 amino acids

Sequence
(BLAST)

001: MAMLPLTNPT PIRHNALSSS SFVQRKCVSL IPRIRTCDSE PQRRRFASVT CCSFSTLDSA KIKVVGVGGG GNNAVNRMIG CGLHGVEFYA INTDAQALLH
101: SSAENPIKIG ELLTRGLGTG GNPLLGEQAA EESKEAIANA LQGSDLVFVT AGMGGGTGSG AAPVVARIAK EAGYLTVGVV TYPFSFEGRK RSLQALEAIE
201: KLQKNVDTLI VIPNDRLLDM ADEQTPLQDA FRLADDVLRQ GVQGISDIIT IPGLVNVDFA DVKAVMKDSG TAMLGVGVSS SKNRAEEAAE QATLAPLIGS
301: SIQSATGVVY NITGGKDITL QEVNRVSQVV TSLADPSANI IFGAVVDDRY NGEIHVTIIA TGFSQSFQKI LLTDPRAAKL LDREPGGQES KAASPPLKSS
401: NYPSTVASRA SPRKLFF

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.