CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73132
CDY06595
CDY17316
CDY19897
CDY20776
CDY22390
CDY61131
CDY64472

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	CDX73132	AT1G75010.1	17304239
AT5G55280.1	CDY64472	AT1G75010.1	17304239
AT5G55280.1	CDY22390	AT5G42480.1	16146521
AT5G55280.1	CDY61131	AT5G42480.1	16146521
AT5G55280.1	CDY22390	AT5G42480.1	19453460
AT5G55280.1	CDY61131	AT5G42480.1	19453460
AT5G55280.1	CDY06595	AT5G55280.1	16146521
AT5G55280.1	CDY17316	AT5G55280.1	16146521
AT5G55280.1	CDY19897	AT5G55280.1	16146521
AT5G55280.1	CDY20776	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035565.1-P	Field mustard	cytosol	84.0	98.35
CDY20776	Canola	plastid	92.24	92.24
VIT_19s0090g01320.t01	Wine grape	cytosol	75.76	89.2
CDY17316	Canola	plastid	84.0	86.86
CDY19897	Canola	plastid	83.76	86.62
AT5G55280.1	Thale cress	plastid	85.18	83.6
HORVU2Hr1G109020.1	Barley	cytosol	48.71	79.01
Solyc07g065050.2.1	Tomato	plastid	77.41	78.52
PGSC0003DMT400057147	Potato	plastid	77.18	78.28
KRG98668	Soybean	plastid	75.53	76.98
KRH73828	Soybean	plastid	75.06	76.32
KRH14302	Soybean	plastid	74.59	75.84
Os04t0665400-01	Rice	plastid	71.53	75.62
KRH46262	Soybean	plastid	73.65	75.06
GSMUA_Achr7P06230_001	Banana	plastid	72.71	74.64
EES13042	Sorghum	plastid	71.06	74.57
Zm00001d001939_P003	Maize	plastid	70.59	74.07
TraesCS2B01G516000.1	Wheat	plastid	69.88	73.7
TraesCS2D01G488700.1	Wheat	plastid	69.65	73.45
TraesCS2A01G488400.1	Wheat	plastid	69.65	73.45
HORVU0Hr1G018830.1	Barley	cytosol, plastid	71.53	68.78
CDY70774	Canola	cytosol, extracellular, plastid	30.35	48.5
CDY72626	Canola	cytosol, extracellular, plastid	30.35	48.31
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.53	43.17
CDX78122	Canola	plastid	45.41	41.59
CDX73607	Canola	plastid	45.41	41.59
CDY43739	Canola	plastid	46.59	41.51
CDX95369	Canola	extracellular, golgi, plastid	11.29	32.0

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	GO:A0A078EX05	EnsemblPlants:CDY06595	ProteinID:CDY06595
ProteinID:CDY06595.1	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00122732001	InterPro:IPR036525	InterPro:IPR037103	HAMAP:MF_00909
PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135
PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307
TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS
InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000181238F	SEG:seg	:	:	:

Description

BnaC02g13190D

Coordinates

chrLK031971:+:607110..608828

Molecular Weight (calculated)

44639.3 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.035

Length

425 amino acids

Sequence
(BLAST)

001: MAISPLAQLN ELTISSSSSS FLANSISNSL HSSFASTRIS GFPKRRSDSK SKSLRLRCSF SPMETAKIKV VGVGGGGNNA VNRMISSGLQ SVDFYAINTD
101: SQALLQSSAQ TPLQIGELLT RGLGTGGNPL LGEQAAEESK DAIANALKGS DLVFITAGMG GGTGSGAAPV VAQISKEAGY LTVGVVTYPF SFEGRKRSFQ
201: ALEAIEKLQK NVDTLIVIPN DRLLDIADEQ TPLQDAFLLA DDVLRQGVQG ISDIITIPGL VNVDFADVKA VMKDSGTAML GVGVSCGKNR AQEAAEQATL
301: APLIGSSIQS ATGVVYNITG GKDITLQEVN RVSQVVTSLA DPSANIIFGA VVDDRYTGEI HVTIIATGFS QSFQKTLLTD PRAAKLVDKM GSTGQQENKG
401: MSLPHQRQSP ATINPKPSSP RRLFF

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.