Factsheet for Zm00001d013131_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001939_P003
Zm00001d013131_P001
Zm00001d021407_P001
Zm00001d053923_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	Zm00001d021407_P001	AT1G75010.1	17304239
AT5G55280.1	Zm00001d053923_P003	AT5G42480.1	16146521
AT5G55280.1	Zm00001d053923_P003	AT5G42480.1	19453460
AT5G55280.1	Zm00001d001939_P003	AT5G55280.1	16146521
AT5G55280.1	Zm00001d013131_P001	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G109020.1	Barley	cytosol	39.48	40.84
VIT_19s0090g01320.t01	Wine grape	cytosol	42.07	31.58
Bra035565.1-P	Field mustard	cytosol	41.7	31.13
Zm00001d001939_P003	Maize	plastid	45.76	30.62
CDY19897	Canola	plastid	42.8	28.22
CDY20776	Canola	plastid	43.91	28.0
Bra002918.1-P	Field mustard	plastid	42.44	27.98
CDY17316	Canola	plastid	42.44	27.98
KRH46262	Soybean	plastid	42.8	27.82
GSMUA_Achr7P06230_001	Banana	plastid	42.44	27.78
CDY06595	Canola	plastid	43.17	27.53
AT5G55280.1	Thale cress	plastid	43.91	27.48
PGSC0003DMT400057147	Potato	plastid	42.44	27.45
Solyc07g065050.2.1	Tomato	plastid	42.44	27.45
KRG98668	Soybean	plastid	42.07	27.34
KRH14302	Soybean	plastid	41.7	27.03
KRH73828	Soybean	plastid	41.7	27.03
Solyc12g014560.1.1	Tomato	plastid	40.96	23.77
PGSC0003DMT400033429	Potato	plastid	31.73	19.68
Zm00001d010135_P003	Maize	plastid	33.58	17.67
Zm00001d026669_P001	Maize	plastid	33.58	17.37

Protein Annotations

Gene3D:3.40.50.1440	MapMan:35.1	UniProt:A0A1D6GG72	ProteinID:AQK62549.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0051301	InterPro:IPR036525	PFAM:PF00091
PRINTS:PR00423	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SUPFAM:SSF52490	SUPFAM:SSF55307
InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000221D87E	EnsemblPlantsGene:Zm00001d013131	EnsemblPlants:Zm00001d013131_P001
EnsemblPlants:Zm00001d013131_T001	SEG:seg	:	:	:	:

Description

Cell division protein FtsZ homolog 1 chloroplastic

Coordinates

chr5:-:5239316..5245504

Molecular Weight (calculated)

30089.2 Da

IEP (calculated)

6.365

GRAVY (calculated)

-0.197

Length

271 amino acids

Sequence
(BLAST)

001: MYTAPSSPDA NILGKKTGFR VERGEFRFSF MQNLKCYITK PLLEMLSFDH RPCPYAGLGG VEIFEKRKTV LGPSLFHYYQ ESAVTNLYEA LDNRDGILSR
101: CNPMKGLQRG HGKTIRQESK ETMTSYLRIS KEAGIRSCLH NSWDGRGSRS GAAPVVAQIS KEAGYLTVGV VTYPFSFEGL LEALEKLEKS VDTLIVIPND
201: KLLDVADENM PLQDAFLLTD DVLRQGVQGI SDIITIPGLV NVDFADVKVV MKNSGTSLLS YPLKDTEVID H

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.