CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98668
KRH05905
KRH14302
KRH17386
KRH36043
KRH46262
KRH73828

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	KRH36043	AT1G75010.1	17304239
AT5G55280.1	KRH05905	AT5G42480.1	16146521
AT5G55280.1	KRH17386	AT5G42480.1	16146521
AT5G55280.1	KRH05905	AT5G42480.1	19453460
AT5G55280.1	KRH17386	AT5G42480.1	19453460
AT5G55280.1	KRG98668	AT5G55280.1	16146521
AT5G55280.1	KRH14302	AT5G55280.1	16146521
AT5G55280.1	KRH46262	AT5G55280.1	16146521
AT5G55280.1	KRH73828	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14302	Soybean	plastid	94.02	94.02
VIT_19s0090g01320.t01	Wine grape	cytosol	74.16	85.87
Bra035565.1-P	Field mustard	cytosol	73.68	84.85
HORVU2Hr1G109020.1	Barley	cytosol	49.04	78.24
Bra002918.1-P	Field mustard	plastid	76.56	77.86
CDY17316	Canola	plastid	76.32	77.62
KRH46262	Soybean	plastid	77.27	77.46
CDY19897	Canola	plastid	75.84	77.13
KRG98668	Soybean	plastid	76.08	76.26
PGSC0003DMT400057147	Potato	plastid	75.6	75.42
Solyc07g065050.2.1	Tomato	plastid	75.36	75.18
CDY06595	Canola	plastid	76.32	75.06
CDY20776	Canola	plastid	75.12	73.88
GSMUA_Achr7P06230_001	Banana	plastid	72.73	73.43
Os04t0665400-01	Rice	plastid	70.57	73.38
AT5G55280.1	Thale cress	plastid	75.84	73.21
TraesCS2D01G488700.1	Wheat	plastid	70.33	72.95
EES13042	Sorghum	plastid	70.57	72.84
TraesCS2A01G488400.1	Wheat	plastid	69.86	72.46
TraesCS2B01G516000.1	Wheat	plastid	69.62	72.21
Zm00001d001939_P003	Maize	plastid	69.86	72.1
HORVU0Hr1G018830.1	Barley	cytosol, plastid	69.38	65.61
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.03	41.7
KRH67910	Soybean	plastid	44.98	39.58
KRG96197	Soybean	plastid	45.22	39.54
KRH32740	Soybean	plastid	44.98	38.84
KRH20058	Soybean	plastid	44.98	38.68

Protein Annotations

EntrezGene:100808722	MapMan:13.6.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	EMBL:ACUP02001288	InterPro:Cell_div_FtsZ
InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	EnsemblPlantsGene:GLYMA_02G295800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0007017	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010020	GO:GO:0016043	GO:GO:0016787	UniProt:I1JJF1
InterPro:IPR036525	InterPro:IPR037103	EnsemblPlants:KRH73828	ProteinID:KRH73828	ProteinID:KRH73828.1	HAMAP:MF_00909
PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135
PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307
TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS
InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000233746F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:47371134..47374352

Molecular Weight (calculated)

44051.7 Da

IEP (calculated)

6.539

GRAVY (calculated)

-0.014

Length

418 amino acids

Sequence
(BLAST)

001: MAMLHPLTNP NANELLSLSC SSIFHHNALT TSVSLNPRTT KIAPQRLSRR FGSVRCSYAY VDNAKIKVVG IGGGGNNAVN RMIGSGLQGV DFYAINTDAQ
101: ALLNSAAENP IKIGEVLTRG LGTGGNPLLG EQAAEESRDA IADALKGSDL VFITAGMGGG TGSGAAPVVA QISKEAGYLT VGVVTYPFSF EGRKRSLQAF
201: EAIERLQKNV DTLIVIPNDR LLDIADEQMP LQDAFRLADD VLRQGVQGIS DIITVPGLVN VDFADVKAVM KDSGTAMLGV GVSSGKNRAE EAAEQATLAP
301: LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKKLLTDPR AAKLLDKVAE GQESKAVPPP
401: LKSSNKVESR PSPRKLFF

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.