CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73132
CDY06595
CDY17316
CDY19897
CDY20776
CDY22390
CDY61131
CDY64472

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G55280.1	CDX73132	AT1G75010.1	17304239
AT5G55280.1	CDY64472	AT1G75010.1	17304239
AT5G55280.1	CDY22390	AT5G42480.1	16146521
AT5G55280.1	CDY61131	AT5G42480.1	16146521
AT5G55280.1	CDY22390	AT5G42480.1	19453460
AT5G55280.1	CDY61131	AT5G42480.1	19453460
AT5G55280.1	CDY06595	AT5G55280.1	16146521
AT5G55280.1	CDY17316	AT5G55280.1	16146521
AT5G55280.1	CDY19897	AT5G55280.1	16146521
AT5G55280.1	CDY20776	AT5G55280.1	16146521

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002918.1-P	Field mustard	plastid	99.03	99.03
CDY19897	Canola	plastid	98.05	98.05
VIT_19s0090g01320.t01	Wine grape	cytosol	77.37	88.09
CDY06595	Canola	plastid	86.86	84.0
CDY20776	Canola	plastid	85.64	82.82
AT5G55280.1	Thale cress	plastid	87.1	82.68
HORVU2Hr1G109020.1	Barley	cytosol	50.85	79.77
Solyc07g065050.2.1	Tomato	plastid	80.29	78.76
PGSC0003DMT400057147	Potato	plastid	80.05	78.52
KRH46262	Soybean	plastid	77.62	76.5
KRH73828	Soybean	plastid	77.62	76.32
KRH14302	Soybean	plastid	77.62	76.32
KRG98668	Soybean	plastid	76.64	75.54
GSMUA_Achr7P06230_001	Banana	plastid	75.91	75.36
Os04t0665400-01	Rice	plastid	73.24	74.88
TraesCS2A01G488400.1	Wheat	plastid	72.99	74.44
TraesCS2D01G488700.1	Wheat	plastid	72.99	74.44
TraesCS2B01G516000.1	Wheat	plastid	72.75	74.19
EES13042	Sorghum	plastid	72.75	73.83
Zm00001d001939_P003	Maize	plastid	72.26	73.33
HORVU0Hr1G018830.1	Barley	cytosol, plastid	73.24	68.1
CDY70774	Canola	cytosol, extracellular, plastid	32.12	49.62
CDY72626	Canola	cytosol, extracellular, plastid	32.12	49.44
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	27.98	42.44
CDX78122	Canola	plastid	47.2	41.81
CDX73607	Canola	plastid	46.72	41.38
CDY43739	Canola	plastid	47.93	41.3
CDX95369	Canola	extracellular, golgi, plastid	11.68	32.0

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	GO:A0A078FWI7	UniProt:A0A078FWI7	EnsemblPlants:CDY17316
ProteinID:CDY17316	ProteinID:CDY17316.1	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0007017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00095410001	InterPro:IPR036525	InterPro:IPR037103
HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134
ScanProsite:PS01135	PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490
SUPFAM:SSF55307	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf
InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0004EEAE69	SEG:seg	:	:

Description

BnaA10g09500DBnaA10g09500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWI7]

Coordinates

chrLK032072:-:248402..250161

Molecular Weight (calculated)

43152.3 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.071

Length

411 amino acids

Sequence
(BLAST)

001: MAISPLAQLN ELPISSSFLA TSHSLHSTRI SGGFSKQRSK QTRLRCSFSP MESARIKVVG VGGGGNNAVN RMISSGLQSV DFYAINTDSQ ALLQSSAQNP
101: LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF EGRKRSLQAL EAIEKLQKNV
201: DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE EAAEQATLAP LIGSSIQSAT
301: GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLSDPR AAKLLDKTGS SGQQQENKGS HQRQSPATIN
401: TKSSSPRRLF F

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.