CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70774	Canola	cytosol, extracellular, plastid	99.63	100.0
PGSC0003DMT400006855	Potato	cytosol, mitochondrion, nucleus	40.45	76.6
CDX95369	Canola	extracellular, golgi, plastid	35.21	62.67
GSMUA_Achr6P13250_001	Banana	cytosol	79.78	62.1
CDY43739	Canola	plastid	100.0	55.97
AT2G36250.3	Thale cress	plastid	95.51	53.35
CDX78122	Canola	plastid	89.14	51.29
CDX73607	Canola	plastid	87.64	50.43
KRH67910	Soybean	plastid	87.27	49.05
KRG96197	Soybean	plastid	86.89	48.54
VIT_08s0007g03390.t01	Wine grape	plastid	86.14	47.33
Solyc09g009430.2.1	Tomato	plastid	84.27	47.07
KRH20058	Soybean	plastid	85.39	46.91
KRH32740	Soybean	plastid	85.02	46.9
Solyc10g083490.1.1	Tomato	plastid	84.27	46.88
TraesCS1A01G276500.1	Wheat	plastid	80.52	45.45
TraesCS1D01G276000.1	Wheat	plastid	80.52	45.45
TraesCS1B01G285700.2	Wheat	plastid	79.78	45.03
KXG22108	Sorghum	plastid	78.65	44.59
Os05t0443800-01	Rice	plastid	78.65	44.49
Zm00001d010135_P003	Maize	plastid	75.66	39.22
HORVU1Hr1G073840.4	Barley	plastid	77.15	38.22
PGSC0003DMT400006854	Potato	cytosol	46.44	35.33
CDY19897	Canola	plastid	49.44	32.12
CDY17316	Canola	plastid	49.44	32.12
CDY20776	Canola	plastid	48.31	30.35
CDY06595	Canola	plastid	48.31	30.35

Protein Annotations

Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	MapMan:35.1	GO:A0A078K4C9	UniProt:A0A078K4C9	EnsemblPlants:CDY72626
ProteinID:CDY72626	ProteinID:CDY72626.1	InterPro:Cell_div_FtsZ	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00034046001
InterPro:IPR036525	InterPro:IPR037103	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	PANTHER:PTHR30314
PANTHER:PTHR30314:SF14	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TMHMM:TMhelix
InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0004EE24D1

Description

BnaAnng41710DBnaAnng41710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K4C9]

Coordinates

chrLK052297:-:617..2027

Molecular Weight (calculated)

27617.0 Da

IEP (calculated)

4.909

GRAVY (calculated)

0.133

Length

267 amino acids

Sequence
(BLAST)

001: MGGGTGTGAA PVIAGIAKAM GILTVGIATT PFSFEGRRRA VQAQEGLASL RDNVDTLIVI PNDKLLTAVS QSTPVTEAFN LADDILRQGV RGISDIITIP
101: GLVNVDFADV RAIMANAGSS LMGIGTATAG KSRARDAALN AIQSPLLDIG IERATGIVWN ITGGTDLTLF EVNAAAEVIY DLVDPTANLI FGAVVDPSLT
201: GQVSITLIAT GFKRQEEGEG RAAQMAQADT ASTGATRRPS SSSFREGGSV EIPEFLKKKG SSRYPRV

Best Arabidopsis Sequence Match ( AT2G36250.1 )
(BLAST)

001: MATYVSPCFT PSDSRLLTVL RKNVLPENHL GRLNSIRTID SKKNRVVVAA QKSESSPIRN SPRHYQSQAQ DPFLNLHPEI SMLRGEGTST IVNPRKETSS
101: GPVVEDFEEP SAPSNYNEAR IKVIGVGGGG SNAVNRMIES EMSGVEFWIV NTDIQAMRMS PVLPDNRLQI GKELTRGLGA GGNPEIGMNA ARESKEVIEE
201: ALYGSDMVFV TAGMGGGTGT GAAPVIAGIA KAMGILTVGI ATTPFSFEGR RRTVQAQEGL ASLRDNVDTL IVIPNDKLLT AVSQSTPVTE AFNLADDILR
301: QGVRGISDII TIPGLVNVDF ADVRAIMANA GSSLMGIGTA TGKSRARDAA LNAIQSPLLD IGIERATGIV WNITGGSDLT LFEVNAAAEV IYDLVDPTAN
401: LIFGAVVDPA LSGQVSITLI ATGFKRQEEG EGRTVQMVQA DAASVGATRR PSSSFRESGS VEIPEFLKKK GSSRYPRV

Arabidopsis Description

FTSZ2-1Cell division protein FtsZ homolog 2-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82533]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.