CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78122	Canola	plastid	97.41	97.41
CDY70774	Canola	cytosol, extracellular, plastid	50.43	87.97
CDY72626	Canola	cytosol, extracellular, plastid	50.43	87.64
AT3G52750.2	Thale cress	plastid	85.56	83.93
GSMUA_Achr6P13250_001	Banana	cytosol	59.05	79.88
PGSC0003DMT400006855	Potato	cytosol, mitochondrion, nucleus	23.92	78.72
CDY43739	Canola	plastid	79.53	77.36
VIT_08s0007g03390.t01	Wine grape	plastid	77.59	74.07
KRH67910	Soybean	plastid	74.78	73.05
Solyc09g009430.2.1	Tomato	plastid	75.0	72.8
KRG96197	Soybean	plastid	74.35	72.18
Solyc10g083490.1.1	Tomato	plastid	74.35	71.88
KRH20058	Soybean	plastid	74.14	70.78
KRH32740	Soybean	plastid	73.28	70.25
CDX95369	Canola	extracellular, golgi, plastid	22.2	68.67
PGSC0003DMT400006854	Potato	cytosol	51.72	68.38
TraesCS1A01G276500.1	Wheat	plastid	66.59	65.33
TraesCS1D01G276000.1	Wheat	plastid	66.38	65.12
Os05t0443800-01	Rice	plastid	66.16	65.04
TraesCS1B01G285700.2	Wheat	plastid	66.16	64.9
KXG22108	Sorghum	plastid	65.52	64.54
Zm00001d010135_P003	Maize	plastid	64.87	58.45
HORVU1Hr1G073840.4	Barley	plastid	65.09	56.03
CDY19897	Canola	plastid	41.59	46.96
CDY17316	Canola	plastid	41.38	46.72
CDY06595	Canola	plastid	41.59	45.41
CDY20776	Canola	plastid	41.38	45.18

Protein Annotations

MapMan:13.6.1.1.2	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	GO:A0A078C9T1	EnsemblPlants:CDX73607	ProteinID:CDX73607
ProteinID:CDX73607.1	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00109171001	InterPro:IPR036525	InterPro:IPR037103
HAMAP:MF_00909	PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS01135	PANTHER:PTHR30314
PANTHER:PTHR30314:SF14	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307	TIGRFAMs:TIGR00065
InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf	InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0004EF3BC3
SEG:seg	:	:	:	:	:

Description

BnaC08g23960D

Coordinates

chrLK031799:+:1595956..1598929

Molecular Weight (calculated)

49243.9 Da

IEP (calculated)

5.904

GRAVY (calculated)

-0.092

Length

464 amino acids

Sequence
(BLAST)

001: MTTCVSPCLT SPDSRVLTLL RKSVTPEGSR VSCFRMVQGK RNRLVSAQRS EPWSTSSSHT PNHLQSQDPF LNLHPEISML NPRKDSSSTE DLGDSSPPSN
101: YNEARIKVIG VGGGGSNAVN RMIQSEMIGV EFWIVNTDIQ AMRMSPVFPD KRLQIGKELT RGLGAGGNPE IGMNAARESK EAIEEALYGS DMVFVTAGMG
201: GGTGTGGAPI IAGVAKAMGI LTVGIVTTPF SFEGRRRTVQ AQEGIAALRD NVDTLIVIPN DKLLTAVSMS TPVTEAFNLA DDILRQGVRG ISDIITIPGL
301: VNVDFADVRA IMANAGSSLM GIGTATAGKT RARDAALNAI QSPLLDIGIE RATGIVWNIT GGTDLTLFEV NAAAEVIYDL VDPTANLIFG AVVDPSFSGQ
401: VSITLIATGF KRQEEGEGRP LQATQADATM GATTRRPSSS FSEGSSIEIP EFLKKKGRSR YPRL

Best Arabidopsis Sequence Match ( AT3G52750.1 )
(BLAST)

001: MAAYVSPCLT PPDSRVLTVL RKSVLPDHHL GTRVGCLRMS EGTTKRYRVV ASHKYESSSI RNSLNSHSTS HFQSQDSFLN LHPEISMLNP RKETSSVPIT
101: EDLDELSTPN TYNEARIKVI GVGGGGSNAV NRMIESEMIG VEFWIVNTDI QAMRISPVFP DNRLQIGKEL TRGLGAGGNP EIGMNAATES KEAIQEALYG
201: SDMVFVTAGM GGGTGTGGAP IIAGVAKAMG ILTVGIVTTP FSFEGRRRAL QAQEGIAALR DNVDTLIVIP NDKLLAAVSQ STPVTEAFNL ADDILRQGVR
301: GISDIITIPG LVNVDFADVR AIMANAGSSL MGIGTATGKT RARDAALNAI QSPLLDIGIE RATGIVWNIT GGSDLTLFEV NAAAEVIYDL VDPTANLIFG
401: AVVDPSYSGQ ISITLIATGF KRQEEGEGRP LQATQADASM GATRRPSSSF TEGSSIEIPE FLKKKGRSRY PRL

Arabidopsis Description

FTSZ2-2Cell division protein FtsZ homolog 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXJ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.