Factsheet for Solyc12g014560.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033429	Potato	plastid	75.59	80.78
Solyc07g065050.2.1	Tomato	plastid	70.88	79.0
HORVU2Hr1G109020.1	Barley	cytosol	41.11	73.28
GSMUA_Achr7P06230_001	Banana	plastid	61.46	69.32
Os04t0665400-01	Rice	plastid	59.31	68.91
TraesCS2A01G488400.1	Wheat	plastid	59.31	68.73
TraesCS2D01G488700.1	Wheat	plastid	58.89	68.24
TraesCS2B01G516000.1	Wheat	plastid	58.67	67.99
EES13042	Sorghum	plastid	57.82	66.67
Zm00001d001939_P003	Maize	plastid	57.6	66.42
HORVU0Hr1G018830.1	Barley	cytosol, plastid	59.53	62.9
Zm00001d013131_P001	Maize	cytosol, nucleus, plastid	23.77	40.96
Solyc09g009430.2.1	Tomato	plastid	41.54	40.59
Solyc10g083490.1.1	Tomato	plastid	40.9	39.79

Protein Annotations

MapMan:13.6.1.1.1	Gene3D:3.30.1330.20	Gene3D:3.40.50.1440	InterPro:Cell_div_FtsZ	InterPro:Cell_div_FtsZ_CS	InterPro:FtsZ_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874
GO:GO:0007017	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0010020
GO:GO:0016043	GO:GO:0016787	InterPro:IPR036525	InterPro:IPR037103	UniProt:K4DCZ1	HAMAP:MF_00909
PFAM:PF00091	PFAM:PF12327	PRINTS:PR00423	ScanProsite:PS00227	ScanProsite:PS01134	ScanProsite:PS01135
PANTHER:PTHR30314	PANTHER:PTHR30314:SF12	SMART:SM00864	SMART:SM00865	SUPFAM:SSF52490	SUPFAM:SSF55307
EnsemblPlantsGene:Solyc12g014560.1	EnsemblPlants:Solyc12g014560.1.1	TIGRFAMs:TIGR00065	InterPro:Tub_FtsZ_C	InterPro:Tubulin/FtsZ_2-layer-sand-dom	InterPro:Tubulin/FtsZ_C_sf
InterPro:Tubulin/FtsZ_GTPase_sf	InterPro:Tubulin_CS	InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI000276A968	SEG:seg	:

Description

Cell division protein FtsZ homolog 1, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G55280) UniProtKB/Swiss-Prot;Acc:Q42545]

Coordinates

chr12:-:5559684..5566991

Molecular Weight (calculated)

49892.9 Da

IEP (calculated)

9.101

GRAVY (calculated)

0.003

Length

467 amino acids

Sequence
(BLAST)

001: MAVLGLSNRG DILSSSSNSL EFYHKIHSSS VPTQWFPPRT RRKILYKRHR FSISSSLSSK NSAKIKVIGV GGGGNNAVNR MIDSGLQGVD FYSMNTDTQA
101: LSQSTAENPI QIGELLTRGL GTGGNPLLGE QAAEESKEGI ANALKGSDMV FITAGMGGGT GSGAAPVVAQ IAKEAGYLTV GVVTYPFSFE GRKRSLQALE
201: AIKKLQKNVD TLIVIHNDRL LDIADEQTPL QNAFLLADDV LCQGVQGISD IITIPGLVNV DFADVKAIMK NSGTAMLGVG ASSSRNRAEE AAEQATLAPL
301: IESSIQSATG IVYNITGGKD ITLQEVNRVS QVVTSLADPS ANIIFGVVVD ERFNGGIHVT IIATGFTQPF QNTLLNNPRG AKLVDNSKGT TESMVSPYTL
401: SSSNSPSTKS KPPAPRFISC NILYQLIIFF LATQVFTKLG RRSLICCFCN FHLNNLYRPL LIWKGSV

Best Arabidopsis Sequence Match ( AT5G55280.1 )
(BLAST)

001: MAIIPLAQLN ELTISSSSSS FLTKSISSHS LHSSCICASS RISQFRGGFS KRRSDSTRSK SMRLRCSFSP MESARIKVIG VGGGGNNAVN RMISSGLQSV
101: DFYAINTDSQ ALLQSSAENP LQIGELLTRG LGTGGNPLLG EQAAEESKDA IANALKGSDL VFITAGMGGG TGSGAAPVVA QISKDAGYLT VGVVTYPFSF
201: EGRKRSLQAL EAIEKLQKNV DTLIVIPNDR LLDIADEQTP LQDAFLLADD VLRQGVQGIS DIITIPGLVN VDFADVKAVM KDSGTAMLGV GVSSSKNRAE
301: EAAEQATLAP LIGSSIQSAT GVVYNITGGK DITLQEVNRV SQVVTSLADP SANIIFGAVV DDRYTGEIHV TIIATGFSQS FQKTLLTDPR AAKLLDKMGS
401: SGQQENKGMS LPHQKQSPST ISTKSSSPRR LFF

Arabidopsis Description

FTSZ1Cell division protein FtsZ homolog 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42545]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.