Factsheet for Bra015875.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002918.1-P
Bra009723.1-P
Bra015875.1-P
Bra022392.1-P
Bra033637.1-P
Bra035565.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75010.1	Bra015875.1-P	AT1G75010.1	17304239
AT1G75010.1	Bra022392.1-P	AT3G19180.1	19564892
AT1G75010.1	Bra009723.1-P	AT5G24020.1	17304239
AT1G75010.1	Bra033637.1-P	AT5G42480.1	19453460
AT1G75010.1	Bra002918.1-P	AT5G55280.1	17304239
AT1G75010.1	Bra035565.1-P	AT5G55280.1	17304239

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64472	Canola	endoplasmic reticulum, extracellular	85.93	81.72
AT1G75010.1	Thale cress	plastid	78.76	78.54
VIT_01s0010g02140.t01	Wine grape	mitochondrion	43.03	45.69
Solyc01g007880.2.1	Tomato	plastid	41.41	39.18
KRH36043	Soybean	plastid	40.87	39.02
Os09t0555600-01	Rice	plastid	36.27	36.22
TraesCS5D01G365000.1	Wheat	plastid	34.91	35.25
TraesCS5A01G356200.1	Wheat	plastid	34.91	35.15
TraesCS5B01G358700.1	Wheat	plastid	34.78	35.01
Zm00001d021407_P001	Maize	plastid	35.72	34.97
OQU89910	Sorghum	plastid	36.27	34.67
HORVU5Hr1G088120.2	Barley	plastid	35.32	32.87
GSMUA_Achr2P03680_001	Banana	nucleus	37.21	24.25

Protein Annotations

MapMan:13.6.1.2.4	Gene3D:2.20.110.10	Gene3D:3.40.50.1440	EnsemblPlantsGene:Bra015875	EnsemblPlants:Bra015875.1	EnsemblPlants:Bra015875.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009536	GO:GO:0009570
GO:GO:0009707	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787
GO:GO:0035452	GO:GO:0043621	InterPro:IPR036525	UniProt:M4DH98	InterPro:MORN	PFAM:PF02493
PRINTS:PR00423	PANTHER:PTHR43215	SMART:SM00698	SUPFAM:SSF52490	SUPFAM:SSF82185	InterPro:Tubulin/FtsZ_GTPase_sf
InterPro:Tubulin_FtsZ_GTPase	UniParc:UPI0002541EFA	SEG:seg	:	:	:

Description

AT1G75010 (E=0.0) ARC3 | ARC3 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3)

Coordinates

chrA07:-:20395046..20399076

Molecular Weight (calculated)

81355.3 Da

IEP (calculated)

5.900

GRAVY (calculated)

-0.290

Length

739 amino acids

Sequence
(BLAST)

001: MPVSMELPVF STLRVPPLFS RLPLLPSLGI QFSSAAAAAA SARLNCTARK ARRRICVMCL VRDSASASAE RDGDGIEVVV IGSRKESIMD SCLDSPFLSL
101: PLRFWSISRD SSGDSVLQPR LHHQDNVLKT MNPVELIQSP PKAFILVASA GYGSDQVEAI NILSAVRSGG SLAVAVLLRP FSFEGRRRLE EVNELAKKLQ
201: QHTSFCIDID IEILLQKDLV TLDEALRNAN NAVSKAINAA SALISGMHGN FIDVMHKDLK ELEGSEVTTI LESYKEAKVG FGVGHNLKTS ILQAIYDCPF
301: FRPGVKDLKA IICIVASSVA LQKKDVRTIL RTFRQTMEYT GDIIVSTVHE PDLEPKVLVT TFFILSSEEE TSSKGNIFSG VLPFVVNIFK KYRSQLQKET
401: SSGLGEALVT MEDSAASSDV QVSNQSVEGF EIDSKEVLEV SESGDSEYLV KEEEPSRNSR LGLGDENIED YGAIQREPIA NWSVDPGYQI EQQRPADSGD
501: TAVLSLGVVN LPVGVRPSKN SNSSLSVASQ PSKKAGSRDE SFFNLNSSTK GSSDDTASTL LSEKYADFTK QRNLSARAAS MLEAERDSSK RWSPIQEMQY
601: RGGLFKGRCQ GGLPEGKGRL VLGDGSIYDG MWHNGKRSGL GTFYFKNGDV FQGTWREDLI HGKGWFYFHK GDRWFANFWK GKASGEGRFY SKSGEIFFGQ
701: FKDGWRDGHF LCIDVDGTRY SETWDDGVLI NRKQMDAGD

Best Arabidopsis Sequence Match ( AT1G75010.1 )
(BLAST)

001: MPISMELPVF STLRVPLFSR LALLPTFGVP FSSLGATTRL NCTSRKARRI CVMCLVRDSA PIETCERAGE DGSDEFIEVL VIGSRKESIM DSCLDSPFPS
101: LPLRFWSISK DSSGGLVLQQ RLNHQDNALK TMNPIELLQS RPRAFILVAS AGYGSDQVEA INILSAVRSG GNLAVAVLLK PFSFEGRKRL EEVNELARKL
201: QQHTNFCIDI DIEVLLQKDL VTLDEALRNA NNAVSMAINA ASALISGMHG NFIDVMHKDL KELEGSEVKT ILESYKEAKV GFGVGHNLKT SILRAIYDCP
301: FFRPGLKDLN AIICIVASSV PLQKKDVKTI LRTFRQTMEY TGDIIVSTVH EPDLEPKVRV TTFFILSSSE VETSNKGNIF SGLVPFVLNI FTRYRSQLQK
401: ETNIGLGETP VSIKDSADST DVKTSNQNIE EFEIDSEDLL EVSENGDDSE YPLKEGEPSR NSRLDLKDEN VEDFGAIQRE PIANWSMDQG YQIEQKWQAD
501: SGDTAVLSLG IVNLPVGVRP SKKLNSNLSV ASQLSRKADS REESFFNPNG STKDSSDTAS TLLSEKYADF TKQRNLSARA SSMLEAERDS SKRWSPILEM
601: QYRGGLFKGR CQGGLPEGKG RLVLGDGSIY DGMWHNGKRS GLGTFYFKNG DVFQGTWRED LIHGKGWFYF HKGDRWFANF WKGKASGEGR FYSKSGEIFF
701: GHFKDGWRHG QFLCIDLDGT RYSETWDDGV LIDRKQVDAG D

Arabidopsis Description

ARC3Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6F6B5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.