Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033637.1-P | Field mustard | mitochondrion, plastid | 82.02 | 83.91 |
| CDY22390 | Canola | mitochondrion, plastid | 82.02 | 83.91 |
| CDY61131 | Canola | plastid | 81.9 | 83.89 |
| VIT_02s0033g00060.t01 | Wine grape | mitochondrion | 60.92 | 61.23 |
| Solyc04g081070.2.1 | Tomato | plastid | 58.3 | 57.02 |
| KRH17386 | Soybean | plastid | 56.3 | 56.8 |
| PGSC0003DMT400009646 | Potato | plastid | 57.93 | 56.24 |
| KRH05905 | Soybean | plastid | 56.05 | 55.85 |
| Os02t0122400-01 | Rice | plastid | 46.94 | 48.89 |
| EES06197 | Sorghum | plastid | 45.94 | 48.29 |
| GSMUA_Achr1P07790_001 | Banana | endoplasmic reticulum, plasma membrane | 52.43 | 47.89 |
| TraesCS6A01G066200.3 | Wheat | plastid | 46.07 | 47.8 |
| TraesCSU01G117700.1 | Wheat | plastid | 45.82 | 47.79 |
| TraesCS6B01G089500.2 | Wheat | plastid | 45.32 | 47.51 |
| HORVU6Hr1G012020.11 | Barley | nucleus | 46.07 | 44.84 |
| Zm00001d053923_P003 | Maize | plastid | 44.19 | 35.4 |
| AT3G19180.1 | Thale cress | plastid | 18.98 | 18.56 |
Protein Annotations
| MapMan:13.6.1.2.5 | PDB:5D9R | PDB:5GTB | PDB:5HAD | EntrezGene:834255 | ProteinID:AAQ18644.1 |
| ProteinID:AAQ18645.1 | ProteinID:AED94815.1 | Symbol:ARC6 | ArrayExpress:AT5G42480 | EnsemblPlantsGene:AT5G42480 | RefSeq:AT5G42480 |
| TAIR:AT5G42480 | RefSeq:AT5G42480-TAIR-G | EnsemblPlants:AT5G42480.1 | TAIR:AT5G42480.1 | EMBL:AY091075 | EMBL:AY150490 |
| EMBL:AY221469 | ProteinID:BAB10489.1 | InterPro:DUF4101 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 |
| GO:GO:0009528 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009706 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010020 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0031357 | GO:GO:0043621 |
| InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_199063.1 | PFAM:PF13355 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33925 |
| PANTHER:PTHR33925:SF3 | UniProt:Q9FIG9 | SUPFAM:SSF46565 | UniParc:UPI00000AC1FB | SEG:seg | : |
Description
ARC6Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FIG9]
Coordinates
chr5:+:16985096..16988796
Molecular Weight (calculated)
88264.8 Da
IEP (calculated)
4.501
GRAVY (calculated)
-0.158
Length
801 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALSHVGIG LSPFQLCRLP PATTKLRRSH NTSTTICSAS KWADRLLSDF NFTSDSSSSS FATATTTATL VSPPPSIDRP ERHVPIPIDF YQVLGAQTHF
101: LTDGIRRAFE ARVSKPPQFG FSDDALISRR QILQAACETL SNPRSRREYN EGLLDDEEAT VITDVPWDKV PGALCVLQEG GETEIVLRVG EALLKERLPK
201: SFKQDVVLVM ALAFLDVSRD AMALDPPDFI TGYEFVEEAL KLLQEEGASS LAPDLRAQID ETLEEITPRY VLELLGLPLG DDYAAKRLNG LSGVRNILWS
301: VGGGGASALV GGLTREKFMN EAFLRMTAAE QVDLFVATPS NIPAESFEVY EVALALVAQA FIGKKPHLLQ DADKQFQQLQ QAKVMAMEIP AMLYDTRNNW
401: EIDFGLERGL CALLIGKVDE CRMWLGLDSE DSQYRNPAIV EFVLENSNRD DNDDLPGLCK LLETWLAGVV FPRFRDTKDK KFKLGDYYDD PMVLSYLERV
501: EVVQGSPLAA AAAMARIGAE HVKASAMQAL QKVFPSRYTD RNSAEPKDVQ ETVFSVDPVG NNVGRDGEPG VFIAEAVRPS ENFETNDYAI RAGVSESSVD
601: ETTVEMSVAD MLKEASVKIL AAGVAIGLIS LFSQKYFLKS SSSFQRKDMV SSMESDVATI GSVRADDSEA LPRMDARTAE NIVSKWQKIK SLAFGPDHRI
701: EMLPEVLDGR MLKIWTDRAA ETAQLGLVYD YTLLKLSVDS VTVSADGTRA LVEATLEESA CLSDLVHPEN NATDVRTYTT RYEVFWSKSG WKITEGSVLA
801: S
101: LTDGIRRAFE ARVSKPPQFG FSDDALISRR QILQAACETL SNPRSRREYN EGLLDDEEAT VITDVPWDKV PGALCVLQEG GETEIVLRVG EALLKERLPK
201: SFKQDVVLVM ALAFLDVSRD AMALDPPDFI TGYEFVEEAL KLLQEEGASS LAPDLRAQID ETLEEITPRY VLELLGLPLG DDYAAKRLNG LSGVRNILWS
301: VGGGGASALV GGLTREKFMN EAFLRMTAAE QVDLFVATPS NIPAESFEVY EVALALVAQA FIGKKPHLLQ DADKQFQQLQ QAKVMAMEIP AMLYDTRNNW
401: EIDFGLERGL CALLIGKVDE CRMWLGLDSE DSQYRNPAIV EFVLENSNRD DNDDLPGLCK LLETWLAGVV FPRFRDTKDK KFKLGDYYDD PMVLSYLERV
501: EVVQGSPLAA AAAMARIGAE HVKASAMQAL QKVFPSRYTD RNSAEPKDVQ ETVFSVDPVG NNVGRDGEPG VFIAEAVRPS ENFETNDYAI RAGVSESSVD
601: ETTVEMSVAD MLKEASVKIL AAGVAIGLIS LFSQKYFLKS SSSFQRKDMV SSMESDVATI GSVRADDSEA LPRMDARTAE NIVSKWQKIK SLAFGPDHRI
701: EMLPEVLDGR MLKIWTDRAA ETAQLGLVYD YTLLKLSVDS VTVSADGTRA LVEATLEESA CLSDLVHPEN NATDVRTYTT RYEVFWSKSG WKITEGSVLA
801: S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.