Factsheet for GSMUA_Achr9P07850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059981	Potato	cytosol	83.88	84.19
Solyc05g056160.2.1	Tomato	extracellular	83.88	83.88
GSMUA_Achr6P28520_001	Banana	extracellular	17.95	52.13
GSMUA_Achr1P13460_001	Banana	cytosol	26.37	50.7
GSMUA_Achr7P15820_001	Banana	cytosol	23.08	28.12
GSMUA_Achr5P24110_001	Banana	cytosol	23.81	27.9
GSMUA_Achr9P20290_001	Banana	cytosol	23.44	23.44
GSMUA_Achr7P03760_001	Banana	cytosol	22.71	22.63

Protein Annotations

MapMan:19.2.6.1.2.5	Gene3D:3.60.20.10	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005839	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:GSMUA_Achr9G07850_001	EnsemblPlants:GSMUA_Achr9P07850_001
EnsemblPlants:GSMUA_Achr9T07850_001	InterPro:IPR023333	InterPro:IPR029055	UniProt:M0TYE4	InterPro:Ntn_hydrolases_N	PFAM:PF00227
PRINTS:PR00141	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF63	InterPro:Pept_T1A_subB
InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI00029553BD	:

Description

Proteasome subunit beta type-5-B [Source:GMGC_GENE;Acc:GSMUA_Achr9G07850_001]

Coordinates

chr9:+:5044429..5047846

Molecular Weight (calculated)

29194.8 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.118

Length

273 amino acids

Sequence
(BLAST)

001: MKLDLSGLQS FTSIPGGAVD GLGEDLFAAP SFQLPACSDF DGFQKDAIQM VKPAKGTTTL AFIFKEGVIV AADSRASMGG YISSQSVKKI IEINPYMLGT
101: MAGGAADCQF WHRNLGIKCR LHELANKRRI SVTGASKLLA NILYSYRGMG LSVGTMIAGW DEKGPGLYYV DSEGGRLKGT RFSVGSGSPY AYGVLDSGYR
201: FDMPVEEAAE LARRAIYHAT FRDGASGGVA SVYHVGPDGW KKLSGDDVGE LHYKYYPVAP TPVEQEMTDA PAA

Best Arabidopsis Sequence Match ( AT3G26340.1 )
(BLAST)

001: MKLDTSGLET TMPVIGFGSN SEMLDGFSSA PSFDLPRTTD FDGFQKKAVE MVKPAKGTTT LAFIFKEGVM VAADSRASMG GYISSQSVKK IIEINPYMLG
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE

Arabidopsis Description

PBE2Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VFG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.