Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038738 | Potato | cytosol | 39.44 | 46.28 |
| CDY70092 | Canola | cytosol | 26.06 | 44.58 |
| HORVU1Hr1G053910.1 | Barley | cytosol | 10.56 | 41.67 |
| GSMUA_Achr9P07850_001 | Banana | cytosol | 50.7 | 26.37 |
| Os06t0153800-01 | Rice | plasma membrane, plastid | 36.62 | 18.77 |
| EER89220 | Sorghum | cytosol | 35.92 | 18.21 |
| Zm00001d045315_P003 | Maize | cytosol | 36.62 | 17.99 |
| TraesCS7B01G008100.1 | Wheat | golgi, unclear | 32.39 | 16.49 |
| TraesCS7D01G105500.1 | Wheat | cytosol | 32.39 | 16.49 |
| TraesCS7A01G110200.1 | Wheat | cytosol | 31.69 | 16.13 |
| GSMUA_Achr6P28520_001 | Banana | extracellular | 9.86 | 14.89 |
| GSMUA_Achr9P20290_001 | Banana | cytosol | 14.79 | 7.69 |
| GSMUA_Achr7P03760_001 | Banana | cytosol | 14.79 | 7.66 |
| GSMUA_Achr5P24110_001 | Banana | cytosol | 10.56 | 6.44 |
| GSMUA_Achr7P15820_001 | Banana | cytosol | 9.86 | 6.25 |
| Bra022650.1-P | Field mustard | cytosol | 2.82 | 3.67 |
| Solyc03g063420.1.1 | Tomato | mitochondrion | 2.82 | 2.09 |
Protein Annotations
| Gene3D:3.60.20.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | EnsemblPlantsGene:GSMUA_Achr1G13460_001 | EnsemblPlants:GSMUA_Achr1P13460_001 |
| EnsemblPlants:GSMUA_Achr1T13460_001 | InterPro:IPR029055 | UniProt:M0RZK4 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF63 | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI00029580B2 | : | : |
Description
Proteasome subunit beta type-5-B [Source:GMGC_GENE;Acc:GSMUA_Achr1G13460_001]
Coordinates
chr1:-:10278895..10281549
Molecular Weight (calculated)
15016.9 Da
IEP (calculated)
7.505
GRAVY (calculated)
0.008
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLDASGLQY SPSVTGGGVD GLGEDLFAAP SFQLPDSFDM VKPAKGTTTL AFILKNGVIV AADSRAGMGG YIPSSTVVRH CSFGHRLLLP LPSSTAINPY
101: MLGTMAGGAA DCQFWHRNLG INTAYNNWQT RDGSQSLVLQ SY
101: MLGTMAGGAA DCQFWHRNLG INTAYNNWQT RDGSQSLVLQ SY
001: MKLDTSGLET TMPVIGFGSN SEMLDGFSSA PSFDLPRTTD FDGFQKKAVE MVKPAKGTTT LAFIFKEGVM VAADSRASMG GYISSQSVKK IIEINPYMLG
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE
Arabidopsis Description
PBE2Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VFG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.