Factsheet for Bra022650.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83281	Canola	extracellular	66.06	53.73
Bra026938.1-P	Field mustard	cytosol	65.14	31.0
Solyc03g063420.1.1	Tomato	mitochondrion	49.54	28.27
Bra019807.1-P	Field mustard	cytosol	65.14	25.91
TraesCS7D01G105500.1	Wheat	cytosol	56.88	22.22
TraesCS7B01G008100.1	Wheat	golgi, unclear	56.88	22.22
TraesCS7A01G110200.1	Wheat	cytosol	56.88	22.22
HORVU5Hr1G110330.1	Barley	cytosol	56.88	22.22
Os06t0153800-01	Rice	plasma membrane, plastid	52.29	20.58
EER89220	Sorghum	cytosol	52.29	20.36
Zm00001d045315_P003	Maize	cytosol	53.21	20.07
HORVU7Hr1G022970.1	Barley	plastid	56.88	18.34
Bra024015.1-P	Field mustard	cytosol	29.36	13.73
Bra011257.1-P	Field mustard	cytosol	28.44	13.3
Bra010243.1-P	Field mustard	cytosol	28.44	13.3
Bra033011.1-P	Field mustard	cytosol	24.77	9.89
HORVU1Hr1G053910.1	Barley	cytosol	2.75	8.33
Bra025276.1-P	Field mustard	cytosol	24.77	4.9
PGSC0003DMT400038738	Potato	cytosol	4.59	4.13
GSMUA_Achr1P13460_001	Banana	cytosol	3.67	2.82

Protein Annotations

Gene3D:3.60.20.10	MapMan:35.1	EnsemblPlantsGene:Bra022650	EnsemblPlants:Bra022650.1	EnsemblPlants:Bra022650.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR029055	UniProt:M4E1K0	InterPro:Ntn_hydrolases_N	PFAM:PF00227
PRINTS:PR00141	PANTHER:PTHR11599	PANTHER:PTHR11599:SF63	InterPro:Pept_T1A_subB	InterPro:Proteasome_sua/b	SUPFAM:SSF56235
UniParc:UPI0002546C06	:	:	:	:	:

Description

AT3G26340 (E=6e-034) | 20S proteasome beta subunit E, putative

Coordinates

chrA02:+:8260739..8261839

Molecular Weight (calculated)

11644.4 Da

IEP (calculated)

4.429

GRAVY (calculated)

-0.424

Length

109 amino acids

Sequence
(BLAST)

001: MKLDTSGFET SMPTIGFGSS NDMLDGFSTV PSFDLPRTTD GPGLYYVDNE GRRLKGDRFS VGSGSPYAYG VLDSGYKFDM SVEEASELAR RSIYHATFRD
101: GASGGVASG

Best Arabidopsis Sequence Match ( AT3G26340.1 )
(BLAST)

001: MKLDTSGLET TMPVIGFGSN SEMLDGFSSA PSFDLPRTTD FDGFQKKAVE MVKPAKGTTT LAFIFKEGVM VAADSRASMG GYISSQSVKK IIEINPYMLG
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KFDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPQG WTKLSGDDVG ELHYHYYPVA PITAEHVMEE AAE

Arabidopsis Description

PBE2Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VFG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.