Factsheet for HORVU7Hr1G022970.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G013820.4
HORVU5Hr1G059690.7
HORVU6Hr1G076380.4
HORVU7Hr1G039360.7
HORVU7Hr1G039390.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G26340.1	HORVU2Hr1G013820.4	AT1G10530.1	21798944
AT3G26340.1	HORVU5Hr1G059690.7	AT1G10530.1	21798944
AT3G26340.1	HORVU6Hr1G076380.4	AT1G10530.1	21798944
AT3G26340.1	HORVU7Hr1G039360.7	AT1G10530.1	21798944
AT3G26340.1	HORVU7Hr1G039390.1	AT1G10530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G053910.1	Barley	cytosol	9.76	91.67
TraesCS7B01G008100.1	Wheat	golgi, unclear	73.08	88.53
TraesCS7A01G110200.1	Wheat	cytosol	71.3	86.38
HORVU5Hr1G110330.1	Barley	cytosol	71.01	86.02
TraesCS7D01G105500.1	Wheat	cytosol	70.41	85.3
Os06t0153800-01	Rice	plasma membrane, plastid	62.43	76.17
EER89220	Sorghum	cytosol	61.54	74.29
Zm00001d045315_P003	Maize	cytosol	63.31	74.05
VIT_01s0010g02900.t01	Wine grape	cytosol	57.1	70.96
KRH54198	Soybean	nucleus	56.8	70.59
KRH63751	Soybean	cytosol	56.51	70.22
AT3G26340.1	Thale cress	cytosol	55.92	69.23
AT1G13060.3	Thale cress	cytosol	55.03	62.42
Solyc03g063420.1.1	Tomato	mitochondrion	33.73	59.69
Bra022650.1-P	Field mustard	cytosol	18.34	56.88
HORVU1Hr1G090810.1	Barley	cytosol	19.23	26.64
HORVU7Hr1G018660.1	Barley	cytosol	18.64	25.61
HORVU1Hr1G028190.1	Barley	plastid	17.75	18.93

Protein Annotations

MapMan:19.2.6.1.2.5	Gene3D:3.60.20.10	UniProt:A0A287VPE1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005839
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0051603	EnsemblPlantsGene:HORVU7Hr1G022970	EnsemblPlants:HORVU7Hr1G022970.1	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PFAM:PF00227	PRINTS:PR00141	ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF63
InterPro:Pept_T1A_subB	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI000B475BAE
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:34432709..34435123

Molecular Weight (calculated)

36480.3 Da

IEP (calculated)

9.306

GRAVY (calculated)

-0.305

Length

338 amino acids

Sequence
(BLAST)

001: KCLYKQALEP TPILLSSSSS AARKKGRDRP RTRGKVRGSK QRKSSLHRLR RFSPHADDAM IPNLSALENH FGAAAAGGDD FAGLFSADAA GQLALEFPTC
101: DDFDGFQKAT KAMVNNKKGT TTLSFIFDKG VIVAADSRAS MGGYISSQTV RKIIEINPYM LGTMAGGAAD CQFWHRNLGV KCRLHELANK RRISIAGSSK
201: TLANILYSYR GMGLSIGTMI AGFDETGPGL YYVDSEGARL KGSRFSVGSG SLYAYGILDE GYKFNMSVEE AAELARRAIY HATFRDGASG GCVSVYYVGP
301: DGWKKLSGDD VGELHYHYYP VQAAPVEQEM AEAPSAST

Best Arabidopsis Sequence Match ( AT1G13060.1 )
(BLAST)

001: MKLDTSGFET SMPMIGFGSS SDMLDELSSV PSFDLPRTKE FDGFQKKAKD MLKHAKGTTT LAFIFKGGVM VAADSRASMG GYISSQSVKK IIEINPYMLG
101: TMAGGAADCQ FWHRNLGIKC RLHELANKRR ISVSGASKLL ANMLYSYRGM GLSVGTMIAG WDETGPGLYY VDNEGGRLKG DRFSVGSGSP YAYGVLDSGY
201: KYDMSVEEAS ELARRSIYHA TFRDGASGGV ASVYHVGPEG WTKLSGDDVG ELHYHYYPVA PATAEQVMEE ATAE

Arabidopsis Description

PBE120S proteasome beta subunit E1 [Source:UniProtKB/TrEMBL;Acc:F4HP14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.