Factsheet for HORVU1Hr1G028190.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G123600.1	Wheat	cytosol, golgi, unclear	84.54	98.53
TraesCS1A01G122700.1	Wheat	cytosol	84.23	98.16
TraesCS1B01G141900.1	Wheat	cytosol	83.91	97.79
Zm00001d019262_P001	Maize	cytosol	76.66	89.01
EER98255	Sorghum	cytosol	76.66	89.01
KXG19118	Sorghum	cytosol	76.03	88.28
Os05t0187000-01	Rice	plastid	75.39	87.87
GSMUA_Achr9P20290_001	Banana	cytosol	70.66	82.05
GSMUA_Achr7P03760_001	Banana	cytosol	69.72	80.66
VIT_01s0137g00420.t01	Wine grape	cytosol	69.4	80.59
KRH73888	Soybean	cytosol, nucleus	68.45	80.07
KRH14247	Soybean	cytosol	68.45	80.07
PGSC0003DMT400034355	Potato	cytosol, mitochondrion	42.9	77.27
AT5G40580.1	Thale cress	cytosol	65.93	76.28
Solyc04g024420.2.1	Tomato	cytosol, extracellular	65.3	75.82
AT3G27430.2	Thale cress	cytosol	64.35	74.73
CDY34146	Canola	cytosol	63.72	73.99
Bra033011.1-P	Field mustard	cytosol	63.72	73.99
Solyc05g013820.2.1	Tomato	nucleus	57.73	73.49
CDX83694	Canola	golgi	66.25	63.44
CDY03969	Canola	extracellular	65.62	63.41
PGSC0003DMT400043694	Potato	cytosol	62.15	59.7
Zm00001d035915_P001	Maize	extracellular	77.92	57.58
CDY13711	Canola	cytosol	68.77	41.52
Bra025276.1-P	Field mustard	cytosol	67.82	39.02
HORVU1Hr1G090810.1	Barley	cytosol	19.87	25.82
HORVU7Hr1G018660.1	Barley	cytosol	19.87	25.61
HORVU5Hr1G110330.1	Barley	cytosol	17.35	19.71
HORVU1Hr1G053910.1	Barley	cytosol	2.21	19.44
HORVU7Hr1G022970.1	Barley	plastid	18.93	17.75

Protein Annotations

MapMan:19.2.6.1.2.2	Gene3D:3.60.20.10	UniProt:A0A287F0C4	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:HORVU1Hr1G028190
EnsemblPlants:HORVU1Hr1G028190.1	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PRINTS:PR00141
ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF67	InterPro:Pept_T1A_subB	InterPro:Proteasome_bsu_CS
InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI000B4670E1	SEG:seg	:

Description

Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A287F0C4]

Coordinates

chrchr1H:+:149524661..149527456

Molecular Weight (calculated)

34048.5 Da

IEP (calculated)

8.234

GRAVY (calculated)

-0.315

Length

317 amino acids

Sequence
(BLAST)

001: PIQQTPTPQN TQTEAQKKTR STGTRSKLPP SSSSPTHSGS EISRRMAGSM ELPTKGGFSF DLCRRNAMLE KTGHKMPGFR KTGTTIVGLV FTDGVVLGAD
101: TRATEGPIVA DKNCEKIHFM APNIYCCGAG TAADTEAVTD MVSSQLQLHR YATSRESRVV TALTLLKTHL FNYQGHVSAA LVLGGVDVTG PHLHTVYPHG
201: STDTLPFATM GSGSLAAMSV FELKYREGLT REEGIALVAE AIRAGIFNDL GSGSNVDVCV ITKGNTEYLR NHELPNPRTF VSSKGYSFNK GHTEVLSTKI
301: TQLKLKPEVA DGDAMEE

Best Arabidopsis Sequence Match ( AT5G40580.2 )
(BLAST)

001: MSQSSVDIPP KGGFSFDLCK RNDMLTQKGL KAPSFLKTGT TIVGLIFKDG VILGADTRAT EGPIVADKNC EKIHYMAPNI YCCGAGTAAD TEAVTDMVSS
101: QLRLHRYQTG RDSRVVTALT LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK YKEGLTRDEG IKLVAEAICS
201: GIFNDLGSGS NVDICVITKG HKEYLRNYME PNPRTYVSSK GYSFTKKTEV LLTKITPLLE RVEIVEVAGE AMEE

Arabidopsis Description

PBB2Proteasome subunit beta type-7-B [Source:UniProtKB/Swiss-Prot;Acc:Q7DLS1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.