CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025276.1-P	Field mustard	cytosol	99.43	94.74
AT3G27430.2	Thale cress	cytosol	47.62	91.58
CDY34146	Canola	cytosol	46.86	90.11
CDX83694	Canola	golgi	52.57	83.38
VIT_01s0137g00420.t01	Wine grape	cytosol	43.05	82.78
KRH73888	Soybean	cytosol, nucleus	42.48	82.29
KRH14247	Soybean	cytosol	42.48	82.29
Os05t0187000-01	Rice	plastid	41.9	80.88
EER98255	Sorghum	cytosol	41.9	80.59
Zm00001d019262_P001	Maize	cytosol	41.9	80.59
Solyc04g024420.2.1	Tomato	cytosol, extracellular	41.9	80.59
PGSC0003DMT400034355	Potato	cytosol, mitochondrion	26.86	80.11
TraesCS1D01G123600.1	Wheat	cytosol, golgi, unclear	41.14	79.41
TraesCS1A01G122700.1	Wheat	cytosol	41.14	79.41
KXG19118	Sorghum	cytosol	41.14	79.12
TraesCS1B01G141900.1	Wheat	cytosol	40.76	78.68
GSMUA_Achr7P03760_001	Banana	cytosol	40.76	78.1
GSMUA_Achr9P20290_001	Banana	cytosol	40.57	78.02
Solyc05g013820.2.1	Tomato	nucleus	36.76	77.51
CDY03969	Canola	extracellular	48.19	77.13
HORVU1Hr1G028190.1	Barley	plastid	41.52	68.77
PGSC0003DMT400043694	Potato	cytosol	40.0	63.64
OQU86162	Sorghum	plastid	17.14	56.96
Zm00001d035915_P001	Maize	extracellular	43.81	53.61
CDY36450	Canola	cytosol	12.76	28.76
CDY13421	Canola	cytosol	12.38	27.9
CDY28254	Canola	cytosol	12.38	27.9
CDY23291	Canola	cytosol	12.38	27.9
CDX68732	Canola	cytosol	12.38	27.9
CDX72300	Canola	cytosol	12.19	27.47
CDX83281	Canola	extracellular	6.86	26.87
CDY16054	Canola	extracellular	12.38	23.72
CDX98014	Canola	extracellular	12.38	23.72
CDY34594	Canola	cytosol	12.38	23.72
CDY19402	Canola	cytosol	12.38	23.72
CDY26610	Canola	cytosol	12.38	23.72
CDY21081	Canola	extracellular	12.38	23.72
CDY70092	Canola	cytosol	3.43	21.69

Protein Annotations

MapMan:19.2.6.1.2.2	Gene3D:3.60.20.10	GO:A0A078FKN6	UniProt:A0A078FKN6	EnsemblPlants:CDY13711	ProteinID:CDY13711
ProteinID:CDY13711.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:GSBRNA2T00078136001
InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PRINTS:PR00141	ScanProsite:PS00854
PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF67	InterPro:Pept_T1A_subB	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type
InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI0004EDBE15	SEG:seg	:	:

Description

BnaA06g32120DBnaA06g32120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKN6]

Coordinates

chrLK032037:+:706644..710512

Molecular Weight (calculated)

54744.5 Da

IEP (calculated)

4.431

GRAVY (calculated)

-0.143

Length

525 amino acids

Sequence
(BLAST)

001: MKKNHATAAR TDPETDISID EALPVGAEAS GPSLAGPSSA DDEGDMSGVG DGGDEAEGES DELVGPSALS PELESGLDAG VLVDDDVGGF ALAPPPEDGE
101: ALGVVVEFFL ALVGAEALGG EVGAEAVDFC GDAAVDFGDA AAAGDFGGDA GGDFGGDAGV DFGDAAAAGE GDVELLSPLA LGAPAGFGGS AAKTAVMAKA
201: ATARDRSLRV IIEGEKDIKA KKKSYFGEMK EELFRDSSRV RIHSRPGQFR RMSQSTVDVP PKGGFSFDLC KRNDMLIQKG LKAPSFLKTG TTIVGLIFKD
301: GVILGADTRA TEGPIVADKN CEKIHYMAPN IYCCGAGTAA DTEAVTDMVS SQLRLHRYQT GRDSRVITAL TLLKKHLFSY QGHVSAALVL GGVDITGPHL
401: HTIYPHGSTD TLPFATMGSG SLAAMSVFEA KYKEGLTRDE GIKLVAEAIC SGIFNDLGSG SNVDICVITK GNKEYLRNYM EPNPRTYVSS KGYSFTKKTE
501: VLRTKITPLM ERVEITEVTG EAMEE

Best Arabidopsis Sequence Match ( AT3G27430.2 )
(BLAST)

001: MSQSTVDVPP KGGFSFDLCK RNDMLTQKGL KAPSFLKTGT TIVGLIFKDG VILGADTRAT EGPIVADKNC EKIHYMAPNI YCCGAGTAAD TEAVTDMVSS
101: QLRLHRYQTG RDSRVITALT LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK YKEGLTRDEG IKLVAESICS
201: GIFNDLGSGS NVDICVITKG NKEYLRNYME PNPRTYVSSK GYSFTKKTEV LLTKITPLLE RVEITEVGEA MEE

Arabidopsis Description

PBB1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VCF7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.