Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- mitochondrion 4
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
28052459
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT3G27430.2 | Thale cress | cytosol | 80.79 | 97.07 |
CDY34146 | Canola | cytosol | 77.13 | 92.67 |
KRH14247 | Soybean | cytosol | 66.46 | 80.44 |
KRH73888 | Soybean | cytosol, nucleus | 66.46 | 80.44 |
CDX83694 | Canola | golgi | 80.18 | 79.46 |
VIT_01s0137g00420.t01 | Wine grape | cytosol | 65.55 | 78.75 |
Solyc05g013820.2.1 | Tomato | nucleus | 59.76 | 78.71 |
GSMUA_Achr9P20290_001 | Banana | cytosol | 64.33 | 77.29 |
Zm00001d019262_P001 | Maize | cytosol | 64.33 | 77.29 |
Os05t0187000-01 | Rice | plastid | 63.72 | 76.84 |
GSMUA_Achr7P03760_001 | Banana | cytosol | 64.02 | 76.64 |
Solyc04g024420.2.1 | Tomato | cytosol, extracellular | 63.72 | 76.56 |
EER98255 | Sorghum | cytosol | 63.72 | 76.56 |
KXG19118 | Sorghum | cytosol | 63.41 | 76.19 |
TraesCS1D01G123600.1 | Wheat | cytosol, golgi, unclear | 62.5 | 75.37 |
TraesCS1A01G122700.1 | Wheat | cytosol | 62.5 | 75.37 |
TraesCS1B01G141900.1 | Wheat | cytosol | 62.2 | 75.0 |
PGSC0003DMT400034355 | Potato | cytosol, mitochondrion | 39.33 | 73.3 |
HORVU1Hr1G028190.1 | Barley | plastid | 63.41 | 65.62 |
PGSC0003DMT400043694 | Potato | cytosol | 64.94 | 64.55 |
OQU86162 | Sorghum | plastid | 28.35 | 58.86 |
Zm00001d035915_P001 | Maize | extracellular | 64.63 | 49.42 |
CDY13711 | Canola | cytosol | 77.13 | 48.19 |
CDY36450 | Canola | cytosol | 20.12 | 28.33 |
CDY28254 | Canola | cytosol | 19.51 | 27.47 |
CDY23291 | Canola | cytosol | 19.51 | 27.47 |
CDY13421 | Canola | cytosol | 19.51 | 27.47 |
CDX68732 | Canola | cytosol | 19.51 | 27.47 |
CDX72300 | Canola | cytosol | 19.21 | 27.04 |
CDX83281 | Canola | extracellular | 10.98 | 26.87 |
CDY34594 | Canola | cytosol | 19.51 | 23.36 |
CDY26610 | Canola | cytosol | 19.51 | 23.36 |
CDY21081 | Canola | extracellular | 19.51 | 23.36 |
CDY19402 | Canola | cytosol | 19.51 | 23.36 |
CDY16054 | Canola | extracellular | 19.51 | 23.36 |
CDX98014 | Canola | extracellular | 19.51 | 23.36 |
CDY70092 | Canola | cytosol | 5.18 | 20.48 |
Protein Annotations
MapMan:19.2.6.1.2.2 | Gene3D:3.60.20.10 | GO:A0A078ETP2 | EnsemblPlants:CDY03969 | ProteinID:CDY03969 | ProteinID:CDY03969.1 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00117490001 | InterPro:IPR023333 | InterPro:IPR029055 |
InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PRINTS:PR00141 | ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 |
PANTHER:PTHR11599:SF67 | InterPro:Pept_T1A_subB | InterPro:Proteasome_bsu_CS | InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 |
UniParc:UPI0004EE35FF | : | : | : | : | : |
Description
BnaC02g36840D
Coordinates
chrLK031948:+:20058..22337
Molecular Weight (calculated)
36196.7 Da
IEP (calculated)
8.542
GRAVY (calculated)
-0.131
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLKVNWGR RKHSLFYYLF LASKQLFPLD LYLFSPNPFR FDQPSSSSRL FDFGRMSQAG VDVPAKGGFS FDLCKRNDML IQKGLKAPSF LKTGTTIVGL
101: IFKDGVILGA DTRATEGPIV ADKNCEKIHY MAPNIYCCGA GTAADTEAVT DMVSSQLRLH RYQTGRDSRV ITALTLLKKH LFSYQGHVSA ALVLGGVDIT
201: GPHLHTIYPH GSTDTLPFAT MGSGSLAAMS VFEAKYKEGL TRDEGIKLVA EAICSGIFND LGSGSNVDIC VITKGHKEYL RNYMEPNPRT YVSSKGYSFT
301: KKTEVLRTKI TPLMERVEIT EVGEAMEE
101: IFKDGVILGA DTRATEGPIV ADKNCEKIHY MAPNIYCCGA GTAADTEAVT DMVSSQLRLH RYQTGRDSRV ITALTLLKKH LFSYQGHVSA ALVLGGVDIT
201: GPHLHTIYPH GSTDTLPFAT MGSGSLAAMS VFEAKYKEGL TRDEGIKLVA EAICSGIFND LGSGSNVDIC VITKGHKEYL RNYMEPNPRT YVSSKGYSFT
301: KKTEVLRTKI TPLMERVEIT EVGEAMEE
001: MSQSTVDVPP KGGFSFDLCK RNDMLTQKGL KAPSFLKTGT TIVGLIFKDG VILGADTRAT EGPIVADKNC EKIHYMAPNI YCCGAGTAAD TEAVTDMVSS
101: QLRLHRYQTG RDSRVITALT LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK YKEGLTRDEG IKLVAESICS
201: GIFNDLGSGS NVDICVITKG NKEYLRNYME PNPRTYVSSK GYSFTKKTEV LLTKITPLLE RVEITEVGEA MEE
101: QLRLHRYQTG RDSRVITALT LLKKHLFSYQ GHVSAALVLG GVDITGPHLH TIYPHGSTDT LPFATMGSGS LAAMSVFEAK YKEGLTRDEG IKLVAESICS
201: GIFNDLGSGS NVDICVITKG NKEYLRNYME PNPRTYVSSK GYSFTKKTEV LLTKITPLLE RVEITEVGEA MEE
Arabidopsis Description
PBB1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178VCF7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.